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Protein

UPF0115 protein plu3198

Gene

plu3198

Organism
Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciPLUM243265:G13BC-3121-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0115 protein plu3198UniRule annotation
Gene namesi
Ordered Locus Names:plu3198
OrganismiPhotorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Taxonomic identifieri243265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesMorganellaceaePhotorhabdus
Proteomesi
  • UP000002514 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002145571 – 178UPF0115 protein plu3198Add BLAST178

Interactioni

Protein-protein interaction databases

STRINGi243265.plu3198.

Structurei

3D structure databases

ProteinModelPortaliQ7N290.
SMRiQ7N290.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini99 – 174SmrUniRule annotationAdd BLAST76

Sequence similaritiesi

Belongs to the UPF0115 family.UniRule annotation
Contains 1 Smr domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108DG9. Bacteria.
COG2840. LUCA.
HOGENOMiHOG000257487.
OMAiEHVYCAS.
OrthoDBiPOG091H066U.

Family and domain databases

HAMAPiMF_01042. UPF0115. 1 hit.
InterProiIPR002625. Smr_dom.
IPR022990. UPF0115.
[Graphical view]
PfamiPF01713. Smr. 1 hit.
[Graphical view]
SMARTiSM00463. SMR. 1 hit.
[Graphical view]
SUPFAMiSSF160443. SSF160443. 1 hit.
PROSITEiPS50828. SMR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7N290-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKNKYSLNE EEIHLFQQSV AGTKRINQDT VLHSPRRKKT SYIAPERIQQ
60 70 80 90 100
EQIDASYYFS DEFQPNLDSE GPTRYVRGDT NHYELKKLRR GDYSPELFLD
110 120 130 140 150
LHGLTQMQAK QEIGALIAAC RREHVYCACI MHGHGKHILK QQTPLWLAQH
160 170
PDIIAFHQAP KEWGGNAALL ILIELDEP
Length:178
Mass (Da):20,608
Last modified:December 15, 2003 - v1
Checksum:iC78BB1FEBC100F05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571869 Genomic DNA. Translation: CAE15572.1.

Genome annotation databases

EnsemblBacteriaiCAE15572; CAE15572; plu3198.
KEGGiplu:plu3198.
PATRICi20510808. VBIPhoLum48522_3645.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571869 Genomic DNA. Translation: CAE15572.1.

3D structure databases

ProteinModelPortaliQ7N290.
SMRiQ7N290.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243265.plu3198.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE15572; CAE15572; plu3198.
KEGGiplu:plu3198.
PATRICi20510808. VBIPhoLum48522_3645.

Phylogenomic databases

eggNOGiENOG4108DG9. Bacteria.
COG2840. LUCA.
HOGENOMiHOG000257487.
OMAiEHVYCAS.
OrthoDBiPOG091H066U.

Enzyme and pathway databases

BioCyciPLUM243265:G13BC-3121-MONOMER.

Family and domain databases

HAMAPiMF_01042. UPF0115. 1 hit.
InterProiIPR002625. Smr_dom.
IPR022990. UPF0115.
[Graphical view]
PfamiPF01713. Smr. 1 hit.
[Graphical view]
SMARTiSM00463. SMR. 1 hit.
[Graphical view]
SUPFAMiSSF160443. SSF160443. 1 hit.
PROSITEiPS50828. SMR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY3198_PHOLL
AccessioniPrimary (citable) accession number: Q7N290
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: December 15, 2003
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.