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Q7N121

- SPEA_PHOLL

UniProt

Q7N121 - SPEA_PHOLL

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Protein
Biosynthetic arginine decarboxylase
Gene
speA, plu3681
Organism
Photorhabdus luminescens subsp. laumondii (strain TT01)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the biosynthesis of agmatine from arginine By similarity.UniRule annotation

Catalytic activityi

L-arginine = agmatine + CO2.UniRule annotation

Cofactori

Magnesium By similarity.UniRule annotation
Pyridoxal phosphate By similarity.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. arginine decarboxylase activity Source: UniProtKB-HAMAP
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. arginine catabolic process Source: InterPro
  2. putrescine biosynthetic process Source: UniProtKB-HAMAP
  3. spermidine biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Decarboxylase, Lyase

Keywords - Biological processi

Polyamine biosynthesis, Putrescine biosynthesis, Spermidine biosynthesis

Keywords - Ligandi

Magnesium, Metal-binding, Pyridoxal phosphate

Enzyme and pathway databases

UniPathwayiUPA00186; UER00284.

Names & Taxonomyi

Protein namesi
Recommended name:
Biosynthetic arginine decarboxylase (EC:4.1.1.19)
Short name:
ADC
Gene namesi
Name:speA
Ordered Locus Names:plu3681
OrganismiPhotorhabdus luminescens subsp. laumondii (strain TT01)
Taxonomic identifieri243265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus
ProteomesiUP000002514: Chromosome

Organism-specific databases

GenoListiplu3681.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 634634Biosynthetic arginine decarboxylaseUniRule annotation
PRO_0000149967Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei103 – 1031N6-(pyridoxal phosphate)lysine By similarity

Proteomic databases

PRIDEiQ7N121.

Interactioni

Protein-protein interaction databases

STRINGi243265.plu3681.

Structurei

3D structure databases

ProteinModelPortaliQ7N121.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni283 – 29311Substrate-binding Reviewed prediction
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1166.
HOGENOMiHOG000029191.
KOiK01585.
OMAiIDHYVDG.
OrthoDBiEOG676Z0R.

Family and domain databases

Gene3Di2.40.37.10. 2 hits.
3.20.20.10. 1 hit.
HAMAPiMF_01417. SpeA.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFiPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSiPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR01273. speA. 1 hit.
PROSITEiPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7N121-1 [UniParc]FASTAAdd to Basket

« Hide

MNDNIARKMQ QTYNIAYWGG SYYYVNDLGN VSVCPNPDLP GAKIDLAELV    50
KRVQQEQKHL RLPALFCFPQ ILQHRLRSIN AAFKRARESY GYKGDYFLVY 100
PIKVNQQRRV IESLASSGEP LGLEAGSKAE LMAVLAHAGM TRTVIVCNGY 150
KDREYIRLAL IGEKLGHKVY LVIEKMSEIA QVLEEAERLN VIPRLGVRAR 200
LASQGSGKWQ ASGGEKSKFG LAATQVLQLV ETLRAVDRLD SLQLLHFHLG 250
SQLANIRDIA TGVRESARFY VELHKLGVNI QCFDVGGGLG VDYEGTRSQS 300
DCSVNYGLNE YANNVIWGIG DACDEHGLPH PTVITESGRA LTAHHTVLVS 350
NVIGVERNEF TQTTPPAEDA SRPLTSLWET WQEMHSEGNR RSLRESLHDG 400
QLDLHDVHTQ YAHGMLDLTE RAWAEELYLN ICRRIQQDLD PSNRAHRPII 450
DELQERMADK FYVNFSLFQS LPDAWGIDQL FPVLPIEGLD KPLDRRAVLL 500
DITCDSDGIV DHYVDGDGVA ATMPMPAYDP DCPPMIGFFM VGAYQEILGN 550
MHNLFGDTAA IDVYVFDNGE VTYNQSEEGD SVADMLQYVK LDPNVLMARF 600
RDQVKGADLD TGLQEQFLLE FESGLYGYTY LEDE 634
Length:634
Mass (Da):71,155
Last modified:December 15, 2003 - v1
Checksum:iA3268D93070FDCB5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX571871 Genomic DNA. Translation: CAE16054.1.
RefSeqiNP_930889.1. NC_005126.1.

Genome annotation databases

EnsemblBacteriaiCAE16054; CAE16054; plu3681.
GeneIDi2803693.
KEGGiplu:plu3681.
PATRICi20511872. VBIPhoLum48522_4177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX571871 Genomic DNA. Translation: CAE16054.1 .
RefSeqi NP_930889.1. NC_005126.1.

3D structure databases

ProteinModelPortali Q7N121.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243265.plu3681.

Proteomic databases

PRIDEi Q7N121.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE16054 ; CAE16054 ; plu3681 .
GeneIDi 2803693.
KEGGi plu:plu3681.
PATRICi 20511872. VBIPhoLum48522_4177.

Organism-specific databases

GenoListi plu3681.

Phylogenomic databases

eggNOGi COG1166.
HOGENOMi HOG000029191.
KOi K01585.
OMAi IDHYVDG.
OrthoDBi EOG676Z0R.

Enzyme and pathway databases

UniPathwayi UPA00186 ; UER00284 .

Family and domain databases

Gene3Di 2.40.37.10. 2 hits.
3.20.20.10. 1 hit.
HAMAPi MF_01417. SpeA.
InterProi IPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view ]
PIRSFi PIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSi PR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR01273. speA. 1 hit.
PROSITEi PS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TT01.

Entry informationi

Entry nameiSPEA_PHOLL
AccessioniPrimary (citable) accession number: Q7N121
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: December 15, 2003
Last modified: June 11, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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