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Protein
Submitted name:

Type III secretion component protein SctC

Gene

sctC

Organism
Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion component protein SctCImported
Gene namesi
Name:sctCImported
Ordered Locus Names:plu3778Imported
OrganismiPhotorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)Imported
Taxonomic identifieri243265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus
Proteomesi
  • UP000002514 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence analysisAdd
BLAST
Chaini26 – 614589Sequence analysisPRO_5004291646Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi243265.plu3778.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini185 – 28096Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7N0V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPFQKLCRS LLLSLSISGV MLPSAYSQDL DWFPAPYSYL AKGESLRDVL
60 70 80 90 100
VNFGANYEAS VVVSDKVTDQ VNGHFEQDTP QEFLQHLSSL YNLVWYYDGS
110 120 130 140 150
VLYVFKNSEI QSRLLKLERT NATELQQALK RSGIWEPRFG WRPDPSNQLV
160 170 180 190 200
YVSGPPRYLE LVDQTTSALE QQSLLRSEKT GALTVEIFPL KYASVVDRKI
210 220 230 240 250
QYRDTSIEAP GIATILSRLL SDTNVTAVTG EASSPSMGES YSSRAVVQAE
260 270 280 290 300
PSLNAIIVRD NPERMSMYAH LINALDKPSA RIEVALSIVD IDANNLSELG
310 320 330 340 350
VDWQVGINTG PRHIIDITTS AREKTEIKEK GESIGSAALG SLVDRRGLDY
360 370 380 390 400
LLAKITLLES KGSAQVISRP TLLTQENTQA VIDNNETYYV KVNGERVAEL
410 420 430 440 450
KSLTYGTMLR MIPRVIQVGD SSEISLDLHI EDGNQKPNSS GQDGIPTISR
460 470 480 490 500
TVVDTVARVG HGQSLLIGGI YRDEMSQITR KVPFLGDIPY LGVLFRNTSE
510 520 530 540 550
QVRRSVRLFI IEPRLIDSGI AHYLALGNGQ DLRPGLLATQ DISNQSLSLG
560 570 580 590 600
KVLGSAQCQP LSSARQIQET LRQAGKSSFL DSCRMGNTYG WRVIEQQCSL
610
KETWCVRVQN KANR
Length:614
Mass (Da):68,066
Last modified:December 15, 2003 - v1
Checksum:i017BFBC35D428953
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571871 Genomic DNA. Translation: CAE16150.1.
RefSeqiWP_011147919.1. NC_005126.1.

Genome annotation databases

EnsemblBacteriaiCAE16150; CAE16150; plu3778.
KEGGiplu:plu3778.
PATRICi20512092. VBIPhoLum48522_4289.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571871 Genomic DNA. Translation: CAE16150.1.
RefSeqiWP_011147919.1. NC_005126.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243265.plu3778.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE16150; CAE16150; plu3778.
KEGGiplu:plu3778.
PATRICi20512092. VBIPhoLum48522_4289.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7N0V1_PHOLL
AccessioniPrimary (citable) accession number: Q7N0V1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: September 7, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.