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Q7MTB9 (Q7MTB9_PORGI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL AAQ67015.1
Gene names
Name:dapA EMBL AAQ67015.1
Ordered Locus Names:PG_2052
OrganismPorphyromonas gingivalis (strain ATCC BAA-308 / W83) [Complete proteome] [HAMAP]
Taxonomic identifier242619 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Porphyromonadaceae › Porphyromonas

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subunit structure

Homotetramer By similarity. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Diaminopimelate biosynthesis SAAS SAAS005263
Lysine biosynthesis SAAS SAAS005263
   Cellular componentCytoplasm SAAS SAAS005263
   LigandSchiff base SAAS SAAS005263
   Molecular functionLyase SAAS SAAS005263
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdiaminopimelate biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiondihydrodipicolinate synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q7MTB9 [UniParc].

Last modified December 15, 2003. Version 1.
Checksum: 732E6F4F39182437

FASTA28931,690
        10         20         30         40         50         60 
MGVALITPFD EKGGVDHESL RLLADYQVAG GANYIVVLGT TGESPTIEDA ERSAILQTVR 

        70         80         90        100        110        120 
EAVAGRCPII VGAGGNYTER LVNRIQAMDK TGVDAILSVA PYYNKPTQEG IYRHYRTLAE 

       130        140        150        160        170        180 
STDTSIILYN VPGRTGVNIK SETTLRLATD CPNIIGIKEA SGNVDQVRAI VLEKPDPFIV 

       190        200        210        220        230        240 
LSGDDHLSLS FIKEGAEGVI SVIGNAYPEL FSRLIHLCLE NRFEEAETIQ QRLEGMYYLM 

       250        260        270        280 
FVDGNPAGIK ELLYQKGLIR HNILRLPLVS ASDSTSTLIA RVRNQIEQR

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References

[1]"Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83."
Nelson K.E., Fleischmann R.D., DeBoy R.T., Paulsen I.T., Fouts D.E., Eisen J.A., Daugherty S.C., Dodson R.J., Durkin A.S., Gwinn M.L., Haft D.H., Kolonay J.F., Nelson W.C., Mason T.M., Tallon L., Gray J., Granger D., Tettelin H. expand/collapse author list , Dong H., Galvin J.L., Duncan M.J., Dewhirst F.E., Fraser C.M.
J. Bacteriol. 185:5591-5601(2003) [PubMed: 12949112] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-308 / W83.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015924 Genomic DNA. Translation: AAQ67015.1.
RefSeqNP_906116.1. NC_002950.2.

3D structure databases

HSSPHSSP built from PDB template 1DHP based on UniProtKB P05640.
ProteinModelPortalQ7MTB9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2552035.
GenomeReviewsGene locus PG_2052 in contig AE015924_GR.
KEGGpgi:PG2052.
NMPDRfig|242619.1.peg.1757.
PATRIC22981074. VBIPorGin134034_1907.
TIGRPG_2052.

Phylogenomic databases

HOGENOMHBG358848.
OMAFMLCGGH.
PhylomeDBQ7MTB9.
ProtClustDBCLSK2306166.

Enzyme and pathway databases

BioCycPGIN242619:PG_2052-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7MTB9_PORGI
AccessionPrimary (citable) accession number: Q7MTB9
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: December 14, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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