Q7MLI5 (Q7MLI5_VIBVY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL BAC94206.1

Gene names

Ordered Locus Names:

VV1442 EMBL BAC94206.1

Organism

Vibrio vulnificus (strain YJ016) [Complete proteome] [HAMAP] EMBL BAC94206.1

Taxonomic identifier

196600 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio vulnificus

Protein attributes

Sequence length	581 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7MLI5 [UniParc]. Last modified December 15, 2003. Version 1. Checksum: 3DE7E16BB5841A01	FASTA	581	64,496
	10 20 30 40 50 60 MLIKTGHCSR FGLDCLARTT SIIKSICYMA MEQKTADVSF DSLLKIFTIP EGPDSTLTQI 70 80 90 100 110 120 EAKLSQNLNK FLGEHIVAEE KPLREIEKDF SSAQIPERPS FVSDHTEHLL NTLVSHSVHT 130 140 150 160 170 180 SSPSFIGHMT SALPYFLMPL SKIMIALNQN LVKIETSKAF TPLERQVLGM LHRLIYSQDE 190 200 210 220 230 240 AFYSHWMHSA EHSLGAFCSG GTIANITALW VARNNALRAQ GDFKGVEKEG LFRAMKHYGY 250 260 270 280 290 300 EGLAVLVSER GHYSLKKAAD VLGIGQAGLV AIKTDENNRV CPDALEAKIK ELQAQNIKAF 310 320 330 340 350 360 AVIGVAGTTE TGSVDPLAEM AKICQKYGCH FHVDAAWGGA TLMSNKYRSL LDGVELADSV 370 380 390 400 410 420 TIDAHKQLYI PMGAGMVLFK DPNAMKSIEH HAQYILRKGS KDLGSHTLEG SRSGMAMLVY 430 440 450 460 470 480 ASMHIISRPG YELLINQSIE KAKYFADLIK QQDDFELISE PELCLLTYRY IPARVKQALA 490 500 510 520 530 540 AANAKQQLEL NELLNELTKF TQKRQRETGR SFVSRTRLNP AQWSRMNTIV FRVVLANPLT 550 560 570 580 SFDILASVLE EQRNIIVHQA PNLLAKINKL ADGIITSTQS S

References

[1]

"Comparative genome analysis of Vibrio vulnificus, a marine pathogen." Chen C.Y., Wu K.M., Chang Y.C., Chang C.H., Tsai H.C., Liao T.L., Liu Y.M., Chen H.J., Shen A.B., Li J.C., Su T.L., Shao C.P., Lee C.T., Hor L.I., Tsai S.F. Genome Res. 13:2577-2587(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: YJ016 EMBL BAC94206.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000037 Genomic DNA. Translation: BAC94206.1.
RefSeq	NP_934235.1. NC_005139.1.
3D structure databases
ProteinModelPortal	Q7MLI5.
ModBase	Search...
Protein-protein interaction databases
STRING	196600.VV1442.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC94206; BAC94206; BAC94206.
GeneID	2624246.
KEGG	vvy:VV1442.
PATRIC	20169686. VBIVibVul40472_1430.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000282553.
KO	K01580.
OMA	CHFHVDA.
ProtClustDB	CLSK874231.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7MLI5_VIBVY

Accession

Primary (citable) accession number: Q7MLI5

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2003
Last sequence update:	December 15, 2003
Last modified:	May 1, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)