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Q7MJ50 (GLGA_VIBVY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:VV2312
OrganismVibrio vulnificus (strain YJ016) [Complete proteome] [HAMAP]
Taxonomic identifier196600 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Sequence caution

The sequence BAC95076.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 485485Glycogen synthase HAMAP-Rule MF_00484
PRO_0000188663

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7MJ50 [UniParc].

Last modified January 16, 2004. Version 2.
Checksum: 05428836D7237D6D

FASTA48554,229
        10         20         30         40         50         60 
MATNPLSILF VASEVEGLIK SGGLADVAKA LPEALVNLQH DARIAIPAYT AIPNVCDDEV 

        70         80         90        100        110        120 
ILDTHLETWP HTHYQVKKRF LGDNPVYLIA CGHYFDRPSM YAENNQAYTD NGERFAFFSA 

       130        140        150        160        170        180 
ACLDMLPKIG FQPDIVHAND WHTGLVPFLL KHRYGQDPFF AQTKSILSIH NAVFKGVFHY 

       190        200        210        220        230        240 
DEMQCLPEFH CRNVPDAAVS STHMTMLKAG VMNADKINAV SPTYAEELKT ELGSHGMAWE 

       250        260        270        280        290        300 
FQQRAGDLVG ILNGCDYSAW HPDTDSYLPI NYKATKQSMV RGKNGCKRAL QEQVGLPVKD 

       310        320        330        340        350        360 
VAMFGMVCRL THQKGVHYLL PVLTEFLKLD VQLVLVGTGD PLLAAQLRDV AAQFGEKFVF 

       370        380        390        400        410        420 
VEAYNNQLAH LVEAASDFFL MPSEFEPCGL NQIYSMAYGS LPIVRGVGGL KDSVCDYDVN 

       430        440        450        460        470        480 
PETATGFVFY EPTAQALLIT MQRALLLYAQ NLTELRRVQL YAMERDFCWN KAAEQYVELY 


RSALK 

« Hide

References

[1]"Comparative genome analysis of Vibrio vulnificus, a marine pathogen."
Chen C.-Y., Wu K.-M., Chang Y.-C., Chang C.-H., Tsai H.-C., Liao T.-L., Liu Y.-M., Chen H.-J., Shen A.B.-T., Li J.-C., Su T.-L., Shao C.-P., Lee C.-T., Hor L.-I., Tsai S.-F.
Genome Res. 13:2577-2587(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YJ016.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000037 Genomic DNA. Translation: BAC95076.1. Different initiation.
RefSeqNP_935105.1. NC_005139.1.

3D structure databases

ProteinModelPortalQ7MJ50.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING196600.VV2312.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC95076; BAC95076; BAC95076.
GeneID2625119.
KEGGvvy:VV2312.
PATRIC20171474. VBIVibVul40472_2321.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACRLTEQK.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycVVUL196600:GJ9W-2370-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_VIBVY
AccessionPrimary (citable) accession number: Q7MJ50
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: January 16, 2004
Last modified: February 19, 2014
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways