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Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio vulnificus (strain YJ016)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciVVUL196600:GJ9W-2370-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VV2312
OrganismiVibrio vulnificus (strain YJ016)
Taxonomic identifieri196600 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002675: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 485485Glycogen synthasePRO_0000188663Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi196600.VV2312.

Structurei

3D structure databases

ProteinModelPortaliQ7MJ50.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7MJ50-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATNPLSILF VASEVEGLIK SGGLADVAKA LPEALVNLQH DARIAIPAYT
60 70 80 90 100
AIPNVCDDEV ILDTHLETWP HTHYQVKKRF LGDNPVYLIA CGHYFDRPSM
110 120 130 140 150
YAENNQAYTD NGERFAFFSA ACLDMLPKIG FQPDIVHAND WHTGLVPFLL
160 170 180 190 200
KHRYGQDPFF AQTKSILSIH NAVFKGVFHY DEMQCLPEFH CRNVPDAAVS
210 220 230 240 250
STHMTMLKAG VMNADKINAV SPTYAEELKT ELGSHGMAWE FQQRAGDLVG
260 270 280 290 300
ILNGCDYSAW HPDTDSYLPI NYKATKQSMV RGKNGCKRAL QEQVGLPVKD
310 320 330 340 350
VAMFGMVCRL THQKGVHYLL PVLTEFLKLD VQLVLVGTGD PLLAAQLRDV
360 370 380 390 400
AAQFGEKFVF VEAYNNQLAH LVEAASDFFL MPSEFEPCGL NQIYSMAYGS
410 420 430 440 450
LPIVRGVGGL KDSVCDYDVN PETATGFVFY EPTAQALLIT MQRALLLYAQ
460 470 480
NLTELRRVQL YAMERDFCWN KAAEQYVELY RSALK
Length:485
Mass (Da):54,229
Last modified:January 16, 2004 - v2
Checksum:i05428836D7237D6D
GO

Sequence cautioni

The sequence BAC95076.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000037 Genomic DNA. Translation: BAC95076.1. Different initiation.
RefSeqiNP_935105.1. NC_005139.1.

Genome annotation databases

EnsemblBacteriaiBAC95076; BAC95076; BAC95076.
GeneIDi2625119.
KEGGivvy:VV2312.
PATRICi20171474. VBIVibVul40472_2321.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000037 Genomic DNA. Translation: BAC95076.1. Different initiation.
RefSeqiNP_935105.1. NC_005139.1.

3D structure databases

ProteinModelPortaliQ7MJ50.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196600.VV2312.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC95076; BAC95076; BAC95076.
GeneIDi2625119.
KEGGivvy:VV2312.
PATRICi20171474. VBIVibVul40472_2321.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciVVUL196600:GJ9W-2370-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YJ016.

Entry informationi

Entry nameiGLGA_VIBVY
AccessioniPrimary (citable) accession number: Q7MJ50
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: January 16, 2004
Last modified: January 7, 2015
This is version 68 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.