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Q7MI41

- DEOD1_VIBVY

UniProt

Q7MI41 - DEOD1_VIBVY

Protein

Purine nucleoside phosphorylase DeoD-type 1

Gene

deoD1

Organism
Vibrio vulnificus (strain YJ016)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 2 (10 Jan 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciVVUL196600:GJ9W-2735-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-type 1UniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNP 1UniRule annotation
    Gene namesi
    Name:deoD1UniRule annotation
    Ordered Locus Names:VV2676
    OrganismiVibrio vulnificus (strain YJ016)
    Taxonomic identifieri196600 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002675: Chromosome I

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 239239Purine nucleoside phosphorylase DeoD-type 1PRO_0000063178Add
    BLAST

    Proteomic databases

    PRIDEiQ7MI41.

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Protein-protein interaction databases

    STRINGi196600.VV2676.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7MI41.
    SMRiQ7MI41. Positions 2-237.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0813.
    HOGENOMiHOG000274896.
    KOiK03784.
    OMAiRQTTFSE.
    OrthoDBiEOG6BKJC5.

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.
    PROSITEiPS01232. PNP_UDP_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7MI41-1 [UniParc]FASTAAdd to Basket

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    MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLEDVVQV CDVRNMYGFT    50
    GTYKGRKVSV MGHGMGIPSC SIYATELIKD YGVKKIIRVG SCGAVSTDIK 100
    VRDVVIGMGA CTDSKVNRIR FKGHDFAAIA DYKMVKAAEE AAKARGIDVK 150
    VGNLFSAELF YTPDPEMFDV MDKYGIVGVE MEAAGIYGVA AEYGAKALTI 200
    CTVSDHIKTG EQTTSEERQN TFNDMMIVAL DSVLLGDAE 239
    Length:239
    Mass (Da):25,885
    Last modified:January 10, 2006 - v2
    Checksum:i156CCC732B236B05
    GO

    Sequence cautioni

    The sequence BAC95440.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000037 Genomic DNA. Translation: BAC95440.1. Different initiation.
    RefSeqiNP_935469.2. NC_005139.1.

    Genome annotation databases

    EnsemblBacteriaiBAC95440; BAC95440; BAC95440.
    GeneIDi2625484.
    KEGGivvy:VV2676.
    PATRICi20172184. VBIVibVul40472_2675.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000037 Genomic DNA. Translation: BAC95440.1 . Different initiation.
    RefSeqi NP_935469.2. NC_005139.1.

    3D structure databases

    ProteinModelPortali Q7MI41.
    SMRi Q7MI41. Positions 2-237.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 196600.VV2676.

    Proteomic databases

    PRIDEi Q7MI41.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC95440 ; BAC95440 ; BAC95440 .
    GeneIDi 2625484.
    KEGGi vvy:VV2676.
    PATRICi 20172184. VBIVibVul40472_2675.

    Phylogenomic databases

    eggNOGi COG0813.
    HOGENOMi HOG000274896.
    KOi K03784.
    OMAi RQTTFSE.
    OrthoDBi EOG6BKJC5.

    Enzyme and pathway databases

    BioCyci VVUL196600:GJ9W-2735-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    PROSITEi PS01232. PNP_UDP_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YJ016.

    Entry informationi

    Entry nameiDEOD1_VIBVY
    AccessioniPrimary (citable) accession number: Q7MI41
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 10, 2006
    Last sequence update: January 10, 2006
    Last modified: October 1, 2014
    This is version 70 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3