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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio vulnificus (strain YJ016)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381UniRule annotation
Active sitei544 – 5441UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciVVUL196600:GJ9W-3102-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:VV3004
OrganismiVibrio vulnificus (strain YJ016)
Taxonomic identifieri196600 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002675 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 877877Phosphoenolpyruvate carboxylasePRO_0000166650Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi196600.VV3004.

Structurei

3D structure databases

ProteinModelPortaliQ7MH68.
SMRiQ7MH68. Positions 4-877.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7MH68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNEKYAALKS NVSMLGHLLG NTIQEAHGDE ILEKVETIRK LSKSARAGNQ
60 70 80 90 100
ADRNNLIEEI KSLPDEQLTP VARAFNQFLN LTNIAEQYHT ISRHCDAHVC
110 120 130 140 150
EPDAINTLFA KLGQNGINKL DTAQAIRELN IELVLTAHPT EITRRTMINK
160 170 180 190 200
LVKINECLSK LELSDLSYKE RHKTEKRLEQ LIAQSWHSDV IRKQRPTPLD
210 220 230 240 250
EAKWGFAVVE NSLWEAVPDF LRELDEKLKD YLDQGLPIDA RPVHFSSWMG
260 270 280 290 300
GDRDGNPFVT HTVTREVLLL SRWKAADLYL KDINELISEL SMTKCNDTVR
310 320 330 340 350
QLAGEDEHEP YRAILKQLRT LLSDTKEILD AKINGQKLAV KAPLQSVEQL
360 370 380 390 400
WDPLFACYQS LRECGMSMIA EGSLLDTLRR VKAFGVHLVR LDIRQESTRH
410 420 430 440 450
ADVLSELTRY LGIGDYNHWS EQDKIAFLTN ELASKRPLLP RDWQPSEPVK
460 470 480 490 500
EVLDTCKIIA AQSREAFGAY VISMAKTASD VLAVHLLLQE SGCPYRMDVC
510 520 530 540 550
PLFETLDDLN NAEAVIKQLM SIDLYRGFIQ NHQMVMIGYS DSAKDAGVMA
560 570 580 590 600
AGWAQYHAME ALVNVAEQEG IELTLFHGRG GTIGRGGAPA HAALLSQPPK
610 620 630 640 650
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN MYASAILEAN LLPPPEPKQE
660 670 680 690 700
WRDLMEVLSQ VSCEAYRSVV RGEPDFVPYF RQATPELELG KLPLGSRPAK
710 720 730 740 750
RNPNGGVESL RAIPWIFSWS QNRLLLPAWL GAGEAIQYSI DKGHQALLEE
760 770 780 790 800
MCREWPFFST RLGMLEMVYL KCNSEISRYY DERLADKSLL PLGDRLRDQL
810 820 830 840 850
QSDIKAVLNV ENNENLMQSD PWGQESIRLR NIYIEPLNML QAELLYRTRQ
860 870
AGVVSEELEE ALMVTIAGIA AGMRNTG
Length:877
Mass (Da):98,927
Last modified:May 24, 2004 - v2
Checksum:i6B9038A4BFD62002
GO

Sequence cautioni

The sequence BAC95768.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000037 Genomic DNA. Translation: BAC95768.1. Different initiation.
RefSeqiNP_935797.2. NC_005139.1.

Genome annotation databases

EnsemblBacteriaiBAC95768; BAC95768; BAC95768.
GeneIDi2625853.
KEGGivvy:VV3004.
PATRICi20172876. VBIVibVul40472_2981.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000037 Genomic DNA. Translation: BAC95768.1. Different initiation.
RefSeqiNP_935797.2. NC_005139.1.

3D structure databases

ProteinModelPortaliQ7MH68.
SMRiQ7MH68. Positions 4-877.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196600.VV3004.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC95768; BAC95768; BAC95768.
GeneIDi2625853.
KEGGivvy:VV3004.
PATRICi20172876. VBIVibVul40472_2981.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciVVUL196600:GJ9W-3102-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YJ016.

Entry informationi

Entry nameiCAPP_VIBVY
AccessioniPrimary (citable) accession number: Q7MH68
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 24, 2004
Last sequence update: May 24, 2004
Last modified: March 4, 2015
This is version 68 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.