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Q7MFG6

- DEOD2_VIBVY

UniProt

Q7MFG6 - DEOD2_VIBVY

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Protein

Purine nucleoside phosphorylase DeoD-type 2

Gene

deoD2

Organism
Vibrio vulnificus (strain YJ016)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciVVUL196600:GJ9W-3747-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type 2UniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNP 2UniRule annotation
Gene namesi
Name:deoD2UniRule annotation
Ordered Locus Names:VVA0354
OrganismiVibrio vulnificus (strain YJ016)
Taxonomic identifieri196600 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002675: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 236236Purine nucleoside phosphorylase DeoD-type 2PRO_0000063179Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi196600.VVA0354.

Structurei

3D structure databases

ProteinModelPortaliQ7MFG6.
SMRiQ7MFG6. Positions 2-234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiCDVRSMF.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7MFG6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATPHINAQP GDFAETVLMP GDPLRAKYIA ETFLEDVKQV CDVRNMFGFT
60 70 80 90 100
GTYKGKKVSV MGHGMGIPSA CIYVHELIAE YGVKNVIRVG SCGAVRDDVN
110 120 130 140 150
LMDVVIGMGA STDSKVNRIR FNDHDFAALA DYGLLEEAVK QARAQNVPVK
160 170 180 190 200
VGNVFSADLF YTPEADIFEK MEKLGILGVD MEAAGIYGVA ADLKAKALTI
210 220 230
LTVSDHIIRG EKLSSEDRQK SFNDMMKVAL ETAINL
Length:236
Mass (Da):25,668
Last modified:January 10, 2006 - v2
Checksum:i50AA3F3DE816C2E3
GO

Sequence cautioni

The sequence BAC96380.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000038 Genomic DNA. Translation: BAC96380.1. Different initiation.
RefSeqiNP_936410.2. NC_005140.1.

Genome annotation databases

EnsemblBacteriaiBAC96380; BAC96380; BAC96380.
GeneIDi2621360.
KEGGivvy:VVA0354.
PATRICi20174104. VBIVibVul40472_3560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000038 Genomic DNA. Translation: BAC96380.1 . Different initiation.
RefSeqi NP_936410.2. NC_005140.1.

3D structure databases

ProteinModelPortali Q7MFG6.
SMRi Q7MFG6. Positions 2-234.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 196600.VVA0354.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC96380 ; BAC96380 ; BAC96380 .
GeneIDi 2621360.
KEGGi vvy:VVA0354.
PATRICi 20174104. VBIVibVul40472_3560.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi CDVRSMF.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci VVUL196600:GJ9W-3747-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YJ016.

Entry informationi

Entry nameiDEOD2_VIBVY
AccessioniPrimary (citable) accession number: Q7MFG6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: January 10, 2006
Last modified: October 1, 2014
This is version 68 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3