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Q7MFG6

- DEOD2_VIBVY

UniProt

Q7MFG6 - DEOD2_VIBVY

Protein

Purine nucleoside phosphorylase DeoD-type 2

Gene

deoD2

Organism
Vibrio vulnificus (strain YJ016)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 2 (10 Jan 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciVVUL196600:GJ9W-3747-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-type 2UniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNP 2UniRule annotation
    Gene namesi
    Name:deoD2UniRule annotation
    Ordered Locus Names:VVA0354
    OrganismiVibrio vulnificus (strain YJ016)
    Taxonomic identifieri196600 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002675: Chromosome II

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 236236Purine nucleoside phosphorylase DeoD-type 2PRO_0000063179Add
    BLAST

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Protein-protein interaction databases

    STRINGi196600.VVA0354.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7MFG6.
    SMRiQ7MFG6. Positions 2-234.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0813.
    HOGENOMiHOG000274896.
    KOiK03784.
    OMAiCDVRSMF.
    OrthoDBiEOG6BKJC5.

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7MFG6-1 [UniParc]FASTAAdd to Basket

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    MATPHINAQP GDFAETVLMP GDPLRAKYIA ETFLEDVKQV CDVRNMFGFT    50
    GTYKGKKVSV MGHGMGIPSA CIYVHELIAE YGVKNVIRVG SCGAVRDDVN 100
    LMDVVIGMGA STDSKVNRIR FNDHDFAALA DYGLLEEAVK QARAQNVPVK 150
    VGNVFSADLF YTPEADIFEK MEKLGILGVD MEAAGIYGVA ADLKAKALTI 200
    LTVSDHIIRG EKLSSEDRQK SFNDMMKVAL ETAINL 236
    Length:236
    Mass (Da):25,668
    Last modified:January 10, 2006 - v2
    Checksum:i50AA3F3DE816C2E3
    GO

    Sequence cautioni

    The sequence BAC96380.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000038 Genomic DNA. Translation: BAC96380.1. Different initiation.
    RefSeqiNP_936410.2. NC_005140.1.

    Genome annotation databases

    EnsemblBacteriaiBAC96380; BAC96380; BAC96380.
    GeneIDi2621360.
    KEGGivvy:VVA0354.
    PATRICi20174104. VBIVibVul40472_3560.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000038 Genomic DNA. Translation: BAC96380.1 . Different initiation.
    RefSeqi NP_936410.2. NC_005140.1.

    3D structure databases

    ProteinModelPortali Q7MFG6.
    SMRi Q7MFG6. Positions 2-234.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 196600.VVA0354.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC96380 ; BAC96380 ; BAC96380 .
    GeneIDi 2621360.
    KEGGi vvy:VVA0354.
    PATRICi 20174104. VBIVibVul40472_3560.

    Phylogenomic databases

    eggNOGi COG0813.
    HOGENOMi HOG000274896.
    KOi K03784.
    OMAi CDVRSMF.
    OrthoDBi EOG6BKJC5.

    Enzyme and pathway databases

    BioCyci VVUL196600:GJ9W-3747-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YJ016.

    Entry informationi

    Entry nameiDEOD2_VIBVY
    AccessioniPrimary (citable) accession number: Q7MFG6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 10, 2006
    Last sequence update: January 10, 2006
    Last modified: October 1, 2014
    This is version 68 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3