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Q7MF87 (Q7MF87_VIBVY) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Ordered Locus Names:VVA0433 EMBL BAC96459.1
OrganismVibrio vulnificus (strain YJ016) [Complete proteome] [HAMAP] EMBL BAC96459.1
Taxonomic identifier196600 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
Q7MF87 [UniParc].

Last modified December 15, 2003. Version 1.
Checksum: E8D9E5DA44B7DE0D

FASTA45952,416
        10         20         30         40         50         60 
MTKGDVKKMN QAEHALPTSK ANVILHAFDW KYADIAKQAQ KIQELGYGSV LVSPPLRSAK 

        70         80         90        100        110        120 
SPKWWQRYQP QDYRVIDNAL GNTTDFQNMV TELQRCGVWV YADVVFNHMA NEAKQRADLN 

       130        140        150        160        170        180 
YPSKTVLEEY MCDPEYYESQ RLFGDLSEPL FTEEDFVEAF GIQDWKDKWQ VQNGRISGGP 

       190        200        210        220        230        240 
TDPGLPTLRV HEHVITQQRH YLMALKAMGV KGFRIDAAKH MTLEHIKQVW TEDITQGMHI 

       250        260        270        280        290        300 
FGEIITDGGA TEEEYELFLQ PYLQETRLGA YDFPLFSTLF KAFAPKGSFK SLIDPYCFGQ 

       310        320        330        340        350        360 
ALSNRRAITF VTTHDIPNND VFANLVLDEE NEWLAYAYVL GRDGGTPLIY TDLDTSGILN 

       370        380        390        400        410        420 
QNGQPRWKDA WHDPRMVQMI AFHNRFHGEP MTVLEGNDDM LVFSRGERGF VVINKSARKQ 

       430        440        450 
TISLPLARPL QDMLTGKHFL PMNGKIDIVV AAKTALMMC 

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References

[1]"Comparative genome analysis of Vibrio vulnificus, a marine pathogen."
Chen C.-Y., Wu K.-M., Chang Y.-C., Chang C.-H., Tsai H.-C., Liao T.-L., Liu Y.-M., Chen H.-J., Shen A.B.-T., Li J.-C., Su T.-L., Shao C.-P., Lee C.-T., Hor L.-I., Tsai S.-F.
Genome Res. 13:2577-2587(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YJ016 EMBL BAC96459.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000038 Genomic DNA. Translation: BAC96459.1.
RefSeqNP_936489.1. NC_005140.1.

3D structure databases

ProteinModelPortalQ7MF87.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING196600.VVA0433.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC96459; BAC96459; BAC96459.
GeneID2621199.
KEGGvvy:VVA0433.
PATRIC20174260. VBIVibVul40472_3638.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000274290.
KOK01176.
OMAWQRYQPQ.
OrthoDBEOG6RZB1B.

Enzyme and pathway databases

BioCycVVUL196600:GJ9W-3826-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7MF87_VIBVY
AccessionPrimary (citable) accession number: Q7MF87
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: July 9, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)