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Q7MBY8 (Q7MBY8_VIBVY) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VVA1599 EMBL BAC97625.1
OrganismVibrio vulnificus (strain YJ016) [Complete proteome] [HAMAP] EMBL BAC97625.1
Taxonomic identifier196600 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length223 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

itself2EBI-8298803,EBI-8298803

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding15 – 184NADP PDB 3UCE
Nucleotide binding37 – 393NADP PDB 3UCE
Nucleotide binding43 – 442NADP PDB 3UCE
Nucleotide binding68 – 692NADP PDB 3UCE
Nucleotide binding158 – 1669NADP PDB 3UCE

Sites

Binding site911NADP PDB 3UCE

Sequences

Sequence LengthMass (Da)Tools
Q7MBY8 [UniParc].

Last modified December 15, 2003. Version 1.
Checksum: CBD4EEFF037FAD09

FASTA22323,654
        10         20         30         40         50         60 
MMGSDKTVYV VLGGTSGIGA ELAKQLESEH TIVHVASRQT GLDISDEKSV YHYFETIGAF 

        70         80         90        100        110        120 
DHLIVTAGSY APAGKVVDVE VTQAKYAFDT KFWGAVLAAK HGARYLKQGG SITLTSGMLS 

       130        140        150        160        170        180 
RKVVANTYVK AAINAAIEAT TKVLAKELAP IRVNAISPGL TKTEAYKGMN ADDRDAMYQR 

       190        200        210        220 
TQSHLPVGKV GEASDIAMAY LFAIQNSYMT GTVIDVDGGA LLG 

« Hide

References

« Hide 'large scale' references
[1]"Comparative genome analysis of Vibrio vulnificus, a marine pathogen."
Chen C.-Y., Wu K.-M., Chang Y.-C., Chang C.-H., Tsai H.-C., Liao T.-L., Liu Y.-M., Chen H.-J., Shen A.B.-T., Li J.-C., Su T.-L., Shao C.-P., Lee C.-T., Hor L.-I., Tsai S.-F.
Genome Res. 13:2577-2587(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YJ016 EMBL BAC97625.1.
[2]"Structural and biochemical characterization of an atypical short-chain dehydrogenase/reductase reveals an unusual cofactor preference."
Buysschaert G., Verstraete K., Savvides S.N., Vergauwen B.
FEBS J. 280:1358-1370(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH NADP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000038 Genomic DNA. Translation: BAC97625.1.
RefSeqNP_937655.1. NC_005140.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3UCEX-ray1.80A/B/C/D1-223[»]
3UCFX-ray2.35A/B/C/D1-223[»]
ProteinModelPortalQ7MBY8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-8408766.
STRING196600.VVA1599.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC97625; BAC97625; BAC97625.
GeneID2622461.
KEGGvvy:VVA1599.
PATRIC20176456. VBIVibVul40472_4729.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1028.
OMAMLSRKVV.
OrthoDBEOG679TBX.
ProtClustDBCLSK910318.

Enzyme and pathway databases

BioCycVVUL196600:GJ9W-4999-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PRINTSPR00081. GDHRDH.
ProtoNetSearch...

Entry information

Entry nameQ7MBY8_VIBVY
AccessionPrimary (citable) accession number: Q7MBY8
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: April 16, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)