Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q7MBY8

- Q7MBY8_VIBVY

UniProt

Q7MBY8 - Q7MBY8_VIBVY

Protein
Submitted name:

Dehydrogenase

Gene

VVA1599

Organism
Vibrio vulnificus (strain YJ016)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (15 Dec 2003)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei91 – 911NADPImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi15 – 184NADPImported
    Nucleotide bindingi37 – 393NADPImported
    Nucleotide bindingi43 – 442NADPImported
    Nucleotide bindingi68 – 692NADPImported
    Nucleotide bindingi158 – 1669NADPImported

    GO - Molecular functioni

    1. identical protein binding Source: IntAct
    2. nucleotide binding Source: UniProtKB-KW

    Keywords - Ligandi

    NADPImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciVVUL196600:GJ9W-4999-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DehydrogenaseImported
    Gene namesi
    Ordered Locus Names:VVA1599Imported
    OrganismiVibrio vulnificus (strain YJ016)Imported
    Taxonomic identifieri196600 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002675: Chromosome II

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    itself2EBI-8298803,EBI-8298803

    Protein-protein interaction databases

    MINTiMINT-8408766.
    STRINGi196600.VVA1599.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3UCEX-ray1.80A/B/C/D1-223[»]
    3UCFX-ray2.35A/B/C/D1-223[»]
    ProteinModelPortaliQ7MBY8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1028.
    OMAiRKVVANT.
    OrthoDBiEOG679TBX.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PRINTSiPR00081. GDHRDH.

    Sequencei

    Sequence statusi: Complete.

    Q7MBY8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMGSDKTVYV VLGGTSGIGA ELAKQLESEH TIVHVASRQT GLDISDEKSV    50
    YHYFETIGAF DHLIVTAGSY APAGKVVDVE VTQAKYAFDT KFWGAVLAAK 100
    HGARYLKQGG SITLTSGMLS RKVVANTYVK AAINAAIEAT TKVLAKELAP 150
    IRVNAISPGL TKTEAYKGMN ADDRDAMYQR TQSHLPVGKV GEASDIAMAY 200
    LFAIQNSYMT GTVIDVDGGA LLG 223
    Length:223
    Mass (Da):23,654
    Last modified:December 15, 2003 - v1
    Checksum:iCBD4EEFF037FAD09
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000038 Genomic DNA. Translation: BAC97625.1.
    RefSeqiNP_937655.1. NC_005140.1.

    Genome annotation databases

    EnsemblBacteriaiBAC97625; BAC97625; BAC97625.
    GeneIDi2622461.
    KEGGivvy:VVA1599.
    PATRICi20176456. VBIVibVul40472_4729.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000038 Genomic DNA. Translation: BAC97625.1 .
    RefSeqi NP_937655.1. NC_005140.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3UCE X-ray 1.80 A/B/C/D 1-223 [» ]
    3UCF X-ray 2.35 A/B/C/D 1-223 [» ]
    ProteinModelPortali Q7MBY8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    MINTi MINT-8408766.
    STRINGi 196600.VVA1599.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC97625 ; BAC97625 ; BAC97625 .
    GeneIDi 2622461.
    KEGGi vvy:VVA1599.
    PATRICi 20176456. VBIVibVul40472_4729.

    Phylogenomic databases

    eggNOGi COG1028.
    OMAi RKVVANT.
    OrthoDBi EOG679TBX.

    Enzyme and pathway databases

    BioCyci VVUL196600:GJ9W-4999-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    PRINTSi PR00081. GDHRDH.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YJ016Imported.
    2. "Structural and biochemical characterization of an atypical short-chain dehydrogenase/reductase reveals an unusual cofactor preference."
      Buysschaert G., Verstraete K., Savvides S.N., Vergauwen B.
      FEBS J. 280:1358-1370(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH NADP.

    Entry informationi

    Entry nameiQ7MBY8_VIBVY
    AccessioniPrimary (citable) accession number: Q7MBY8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2003
    Last sequence update: December 15, 2003
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3