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Protein
Submitted name:

Transcriptional regulator, Crp/Fnr family

Gene

PG_0396

Organism
Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciPGIN242619:GHX8-359-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, Crp/Fnr familyImported
Gene namesi
Ordered Locus Names:PG_0396Imported
OrganismiPorphyromonas gingivalis (strain ATCC BAA-308 / W83)Imported
Taxonomic identifieri242619 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaePorphyromonas
Proteomesi
  • UP000000588 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi242619.PG0396.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2GAUX-ray1.90A1-232[»]
ProteinModelPortaliQ7MAW7.
SMRiQ7MAW7. Positions 10-232.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7MAW7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 137121Cyclic nucleotide-bindingInterPro annotationAdd
BLAST
Domaini151 – 22373HTH crp-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH crp-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4107T43. Bacteria.
COG0664. LUCA.
OMAiTELAGMC.
OrthoDBiEOG69GZND.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
SMARTiSM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7MAW7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWKTASDKGL GHLLRDVWSL LNEEERELLD KEIQPFPCKK ASTVFSEGDI
60 70 80 90 100
PNNLFYLYEG KIKILREGVY GRFHISRIVK PGQFFGMRPY FAEETCSSTA
110 120 130 140 150
IAVENSKVLA IPVEAIEALL KGNTSFCRYF LKALAKELGY AERRTVTLTQ
160 170 180 190 200
KHVRGRLAET LLILKENFGF ENDGATLSIY LSREELATLS NMTVSNAIRT
210 220 230
LSTFVSERML ALDGKRIKII DCDRLQKTAR SG
Length:232
Mass (Da):26,279
Last modified:December 15, 2003 - v1
Checksum:i9A80BE3B1C61AEE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015924 Genomic DNA. Translation: AAQ65601.1.
RefSeqiWP_005873831.1. NC_002950.2.

Genome annotation databases

EnsemblBacteriaiAAQ65601; AAQ65601; PG_0396.
GeneIDi2551906.
KEGGipgi:PG0396.
PATRICi22977904. VBIPorGin134034_0363.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015924 Genomic DNA. Translation: AAQ65601.1.
RefSeqiWP_005873831.1. NC_002950.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2GAUX-ray1.90A1-232[»]
ProteinModelPortaliQ7MAW7.
SMRiQ7MAW7. Positions 10-232.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi242619.PG0396.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAQ65601; AAQ65601; PG_0396.
GeneIDi2551906.
KEGGipgi:PG0396.
PATRICi22977904. VBIPorGin134034_0363.

Phylogenomic databases

eggNOGiENOG4107T43. Bacteria.
COG0664. LUCA.
OMAiTELAGMC.
OrthoDBiEOG69GZND.

Enzyme and pathway databases

BioCyciPGIN242619:GHX8-359-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ7MAW7.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
SMARTiSM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-308 / W83Imported.
  2. "The 1.9-A crystal structure of transcriptional regulator, Crp/Fnr family from Porphyromonas gingivalis."
    Rotella F.J., Zhang R.G., Mulligan R., Moy S., Joachimiak A.
    Submitted (MAR-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).

Entry informationi

Entry nameiQ7MAW7_PORGI
AccessioniPrimary (citable) accession number: Q7MAW7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: June 8, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.