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Protein
Submitted name:

Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type

Gene
N/A
Organism
Cucumaria echinata (Sea cucumber)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi77Calcium 1Combined sources1
Metal bindingi81Calcium 1Combined sources1
Metal bindingi81Calcium 2Combined sources1
Metal bindingi101Calcium 3Combined sources1
Metal bindingi103Calcium 3Combined sources1
Metal bindingi104Calcium 1Combined sources1
Metal bindingi109Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi109Calcium 3Combined sources1
Metal bindingi109Calcium 4Combined sources1
Binding sitei109MannoseCombined sources1
Binding sitei109N-acetyl-D-galactosamineCombined sources1
Metal bindingi110Calcium 1Combined sources1
Metal bindingi110Calcium 2Combined sources1
Binding sitei115MannoseCombined sources1
Binding sitei115N-acetyl-D-galactosamineCombined sources1
Metal bindingi123Calcium 3Combined sources1
Metal bindingi123Calcium 4Combined sources1
Metal bindingi124Calcium 3Combined sources1
Metal bindingi124Calcium 4Combined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Lectin CEL-I, N-acetyl-D-galactosamine-specific C-typeImported
OrganismiCucumaria echinata (Sea cucumber)Imported
Taxonomic identifieri40245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEchinodermataEleutherozoaEchinozoaHolothuroideaDendrochirotaceaDendrochirotidaCucumariidaeCucumaria

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi3 ↔ 14Combined sources
Disulfide bondi31 ↔ 135Combined sources
Disulfide bondi36InterchainCombined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WMYX-ray2.00A/B1-140[»]
1WMZX-ray1.70A/B/C/D1-140[»]
4WQQX-ray1.70A/B/C/D1-140[»]
ProteinModelPortaliQ7M462.
SMRiQ7M462.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7M462.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 136C-type lectinInterPro annotationAdd BLAST127

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni101 – 103N-acetyl-D-galactosamine bindingCombined sources3
Regioni123 – 124Mannose bindingCombined sources2
Regioni123 – 124N-acetyl-D-galactosamine bindingCombined sources2

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR016187. CTDL_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7M462-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NQCPTDWEAE GDHCYRFFNT LTTWENAHHE CVSYSCSTLN VRSDLVSVHS
60 70 80 90 100
AAEQAYVFNY WRGIDSQAGQ LWIGLYDKYN EGDFIWTDGS KVGYTKWAGG
110 120 130 140
QPDNWNNAED YGQFRHTEGG AWNDNSAAAQ AKYMCKLTFE
Length:140
Mass (Da):16,032
Last modified:December 15, 2003 - v1
Checksum:i385F2088058EA01C
GO

Sequence databases

PIRiJC7786.

Cross-referencesi

Sequence databases

PIRiJC7786.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WMYX-ray2.00A/B1-140[»]
1WMZX-ray1.70A/B/C/D1-140[»]
4WQQX-ray1.70A/B/C/D1-140[»]
ProteinModelPortaliQ7M462.
SMRiQ7M462.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ7M462.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR016187. CTDL_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7M462_CUCEC
AccessioniPrimary (citable) accession number: Q7M462
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: November 30, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.