Q7KJA9 (Q7KJA9_DROME) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 58.
History...
Names and origin
| Protein names | Submitted name: O-glycosyltransferase EMBL AAF32311.1 Submitted name: SD06381p EMBL ACD81879.1 Submitted name: Super sex combs, isoform A EMBL AAG22338.1 EC=2.4.-.- EMBL AAG22338.1 Submitted name: Super sex combs, isoform B EMBL AAF57338.1 EC=2.4.-.- EMBL AAF57338.1 Submitted name: Super sex combs, isoform C EMBL AAG22339.1 EC=2.4.-.- EMBL AAG22339.1 | ||||||
| Gene names |
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| Organism | Drosophila melanogaster (Fruit fly) EMBL AAF32311.1 | ||||||
| Taxonomic identifier | 7227 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 1059 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
Ontologies
| Keywords | |
|---|---|
| Domain | Repeat RuleBase RU003537 TPR repeat SAAS SAAS001440 RuleBase RU003339 |
| Molecular function | Glycosyltransferase EMBL AAF57338.1 Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | protein glycosylation Inferred from mutant phenotype. Source: FlyBase |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring glycosyl groupsInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The Release 5.1 annotation of Drosophila melanogaster heterochromatin." Smith C.D., Shu S., Mungall C.J., Karpen G.H. Science 316:1586-1591(2007) [PubMed: 17569856] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Sequence finishing and mapping of Drosophila melanogaster heterochromatin." Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., Dimitri P., Karpen G.H., Celniker S.E. Science 316:1625-1628(2007) [PubMed: 17569867] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [4] | "Combined evidence annotation of transposable elements in genome sequences." Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D. PLoS Comput. Biol. 1:166-175(2005) [PubMed: 16110336] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley. |
| [6] | "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly." Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H. Genome Biol. 3:RESEARCH0085.1-RESEARCH0085.16(2002) [PubMed: 12537574] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective." Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J.W., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E. Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed: 12537573] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | "Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence." Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., Pacleb J.M., Park S. Rubin G.M.Genome Biol. 3 (12), RESEARCH0079 (2002) Cited for: NUCLEOTIDE SEQUENCE. |
| [9] | Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [10] | Drosophila Heterochromatin Genome Project Smith C.D., Shu S., Mungall C.J., Karpen G.H. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [11] | FlyBase Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [12] | Celniker S., Carlson J., Kennedy C., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Karpen G. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [13] | Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [14] | "Drosophila melanogaster release 4 sequence." Berkeley Drosophila Genome Project Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [15] | "Drosophila melanogaster O-glycosyltransferase." Rubenstein D.S., McEwen D.G., Peifer M.A. Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF217788 mRNA. Translation: AAF32311.1. AE013599 Genomic DNA. Translation: AAF57338.1. AE013599 Genomic DNA. Translation: AAG22338.1. AE013599 Genomic DNA. Translation: AAG22339.1. BT032865 mRNA. Translation: ACD81879.1. |
| RefSeq | NP_523620.1. NM_078896.2. NP_724406.1. NM_165426.1. NP_724407.1. NM_165427.1. |
| UniGene | Dm.2728. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FCH based on UniProtKB P50542. |
| ProteinModelPortal | Q7KJA9. |
| SMR | Q7KJA9. Positions 20-1056. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q7KJA9. 7 interactions. |
| STRING | Q7KJA9. |
Protein family/group databases | |
| CAZy | GT41. Glycosyltransferase Family 41. |
Proteomic databases | |
| PRIDE | Q7KJA9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblMetazoa | FBtr0086084; FBpp0085420; FBgn0261403. FBtr0086085; FBpp0085421; FBgn0261403. FBtr0086086; FBpp0085422; FBgn0261403. |
| GeneID | 35486. |
| KEGG | dme:Dmel_CG10392. |
| UCSC | CG10392-RA. d. melanogaster. |
Organism-specific databases | |
| CTD | 35486. |
| FlyBase | FBgn0261403. sxc. |
Phylogenomic databases | |
| InParanoid | Q7KJA9. |
| OMA | NFPDAYC. |
| OrthoDB | EOG4C5B09. |
| PhylomeDB | Q7KJA9. |
Gene expression databases | |
| Bgee | Q7KJA9. |
Family and domain databases | |
| InterPro | IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view] |
| Gene3D | G3DSA:1.25.40.10. TPR-like_helical. 2 hits. |
| KO | K09667. |
| Pfam | PF00515. TPR_1. 9 hits. [Graphical view] |
| SMART | SM00028. TPR. 11 hits. [Graphical view] |
| PROSITE | PS50005. TPR. 11 hits. PS50293. TPR_REGION. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 793667. |
Entry information
| Entry name | Q7KJA9_DROME | ||||||||
| Accession | Primary (citable) accession number: Q7KJA9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
