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Q7JYW9 (Q7JYW9_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the hexokinase family. RuleBase RU004510

Sequences

Sequence LengthMass (Da)Tools
Q7JYW9 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 57B3E6254F63710F

FASTA45450,738
        10         20         30         40         50         60 
MLDAEVRELM QPFVLSDYQV QEVYSRFCLE VARGLKRSTH PQANVKCFPT YVQDLPTGDE 

        70         80         90        100        110        120 
MGKYLALDLG GTNFRVLLVS LKGHHDATVD SQIYAVPKDL MVGPGVDLFD HIAGCLAKFV 

       130        140        150        160        170        180 
EKHDMKTAYL PLGFTFSFPC VQLGLKEGIL VRWTKGFDCA GVEGEDVGRM LHEAIQRRGD 

       190        200        210        220        230        240 
ADIAVVAILN DTTGTLMSCA HRNADCRVGV IVGTGCNACY VEDVENVDLL RADFKKTKRS 

       250        260        270        280        290        300 
VIVNAEWGAF GEGGQLDFVR TEYDREVDEK SLNRSEQLFE KMTAGMYLGN LVRLVLLRAL 

       310        320        330        340        350        360 
ERKLIFKQSS RRPEFASVLQ RNEEVFETRY ISEIEDDSFP EFASTRKIVK NLFGLEKASV 

       370        380        390        400        410        420 
EDCQTLRYIC ECVAKRAATL VAIGVSGLVN RTSNRRVIVG MDGSVYRYHP KFDAYMRQTL 

       430        440        450 
QKLVKADKEW DIMLSEDGSG RGAALVAAVA SKTK 

« Hide

References

« Hide 'large scale' references
[1]"Contrasting molecular population genetics of four hexokinases in Drosophila melanogaster, D. simulans and D. yakuba."
Duvernell D.D., Eanes W.F.
Genetics 156:1191-1201(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HFL97e2_15 EMBL AAG23070.1, HFL97e2_23 EMBL AAG23071.1, HFL97e2_4 EMBL AAG23109.1, HFL97e2_43 EMBL AAG23111.1, HFL97e2_52 EMBL AAG23112.1, HFL97e2_61 EMBL AAG23113.1, HFL97e2_76 EMBL AAG23073.1, MA96e2_28.3 EMBL AAG23067.1, MA96e2_3.5 EMBL AAG23064.1, MA96e2_31.3 EMBL AAG23102.1, MA96e2_42.1 EMBL AAG23105.1, MA96e2_45.5 EMBL AAG23106.1, MA96e2_50.4 EMBL AAG23107.1, MA96e2_7.1 EMBL AAG23065.1, VT97e2_1 EMBL AAG23075.1, VT97e2_19 EMBL AAG23082.1, VT97e2_24 EMBL AAG23085.1, VT97e2_44 EMBL AAG23088.1, VT97e2_59 EMBL AAG23089.1, VT97e2_7 EMBL AAG23078.1, VT97e2_9 EMBL AAG23079.1 and ZIM EMBL AAG23091.1.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]Lee S.H., Yang E.S., Kim-Ha J.
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Head EMBL AAG10690.1.
[4]Deobagkar D.N.
Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Oregon-K EMBL CAC34564.1.
[5]Kulkarni G.V., Deobagkar D.D.
Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Oregon-K EMBL CAC34564.1.
[6]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL49341.1.
[7]"Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence."
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., Pacleb J.M., Park S. expand/collapse author list , Pfeiffer B.D., Richards S., Sodergren E.J., Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C., Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[8]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[9]"The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[10]"Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[11]"Combined evidence annotation of transposable elements in genome sequences."
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[12]Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[13]"Drosophila melanogaster release 4 sequence."
Berkeley Drosophila Genome Project
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[14]"The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
Smith C.D., Shu S., Mungall C.J., Karpen G.H.
Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[15]"Sequence finishing and mapping of Drosophila melanogaster heterochromatin."
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., Dimitri P., Karpen G.H., Celniker S.E.
Science 316:1625-1628(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[16]FlyBase
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013599 Genomic DNA. Translation: AAF58160.1.
AF237469 mRNA. Translation: AAG10690.1.
AF257540 Genomic DNA. Translation: AAG23064.1.
AF257541 Genomic DNA. Translation: AAG23065.1.
AF257543 Genomic DNA. Translation: AAG23067.1.
AF257546 Genomic DNA. Translation: AAG23070.1.
AF257547 Genomic DNA. Translation: AAG23071.1.
AF257549 Genomic DNA. Translation: AAG23073.1.
AF257551 Genomic DNA. Translation: AAG23075.1.
AF257554 Genomic DNA. Translation: AAG23078.1.
AF257555 Genomic DNA. Translation: AAG23079.1.
AF257558 Genomic DNA. Translation: AAG23082.1.
AF257561 Genomic DNA. Translation: AAG23085.1.
AF257564 Genomic DNA. Translation: AAG23088.1.
AF257565 Genomic DNA. Translation: AAG23089.1.
AF257567 Genomic DNA. Translation: AAG23091.1.
AF257568 Genomic DNA. Translation: AAG23092.1.
AF257570 Genomic DNA. Translation: AAG23094.1.
AF257571 Genomic DNA. Translation: AAG23095.1.
AF257573 Genomic DNA. Translation: AAG23097.1.
AF257574 Genomic DNA. Translation: AAG23098.1.
AF257575 Genomic DNA. Translation: AAG23099.1.
AF257576 Genomic DNA. Translation: AAG23100.1.
AF257577 Genomic DNA. Translation: AAG23101.1.
AF257578 Genomic DNA. Translation: AAG23102.1.
AF257581 Genomic DNA. Translation: AAG23105.1.
AF257582 Genomic DNA. Translation: AAG23106.1.
AF257583 Genomic DNA. Translation: AAG23107.1.
AF257585 Genomic DNA. Translation: AAG23109.1.
AF257587 Genomic DNA. Translation: AAG23111.1.
AF257588 Genomic DNA. Translation: AAG23112.1.
AF257589 Genomic DNA. Translation: AAG23113.1.
AY070657 mRNA. Translation: AAL48128.1.
AY071719 mRNA. Translation: AAL49341.1.
AJ309864 Genomic DNA. Translation: CAC34564.1.
RefSeqNP_524674.1. NM_079935.3.
UniGeneDm.1873.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0087399; FBpp0086530; FBgn0001187.
GeneID44008.
KEGGdme:Dmel_CG8094.
UCSCCG8094-RA. d. melanogaster.

Organism-specific databases

CTD44008.
FlyBaseFBgn0001187. Hex-C.

Phylogenomic databases

eggNOGCOG5026.
GeneTreeENSGT00390000017159.
InParanoidQ7JYW9.
KOK00844.
OMAFIRRACE.
OrthoDBEOG7S21X5.

Family and domain databases

InterProIPR001312. Hexokinase.
IPR022673. Hexokinase_C.
IPR022672. Hexokinase_N.
[Graphical view]
PANTHERPTHR19443. PTHR19443. 1 hit.
PfamPF00349. Hexokinase_1. 1 hit.
PF03727. Hexokinase_2. 1 hit.
[Graphical view]
PRINTSPR00475. HEXOKINASE.
ProtoNetSearch...

Other

GenomeRNAi44008.
NextBio836583.

Entry information

Entry nameQ7JYW9_DROME
AccessionPrimary (citable) accession number: Q7JYW9
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)