Reviewed,
UniProtKB/Swiss-Prot Q7G794 (LOX3_ORYSJ)
Last modified
July 7, 2009.
Version 35.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Putative lipoxygenase 3 EC=1.13.11.12 | ||||
| Gene names |
| ||||
| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 866 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure By similarity. |
| Catalytic activity | Linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate. |
| Cofactor | Binds 1 iron ion per subunit. Iron is tightly bound By similarity. |
| Pathway | |
| Sequence similarities | Belongs to the lipoxygenase family. Contains 1 lipoxygenase domain. Contains 1 PLAT domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Fatty acid biosynthesis Lipid synthesis Oxylipin biosynthesis |
| Ligand | Iron Metal-binding |
| Molecular function | Dioxygenase Oxidoreductase |
| Gene Ontology (GO) | |
| Biological process | oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW oxylipin biosynthetic processInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | electron carrier activity Inferred from electronic annotation. Source: InterPro iron ion bindingInferred from electronic annotation. Source: UniProtKB-KW lipoxygenase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 866 | 866 | Putative lipoxygenase 3 | PRO_0000220709 | |||||
Regions | |||||||||
| Domain | 33 – 161 | 129 | PLAT | ||||||
| Domain | 164 – 866 | 703 | Lipoxygenase | ||||||
Sites | |||||||||
| Metal binding | 521 | 1 | Iron; catalytic By similarity | ||||||
| Metal binding | 526 | 1 | Iron; catalytic By similarity | ||||||
| Metal binding | 712 | 1 | Iron; catalytic By similarity | ||||||
| Metal binding | 716 | 1 | Iron; catalytic By similarity | ||||||
| Metal binding | 866 | 1 | Iron; via carboxylate; catalytic By similarity | ||||||
Sequences
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References
| [1] | "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species." The rice chromosome 3 sequencing consortium Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.  Jackson S.Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| AC097368 Genomic DNA. Translation: AAO38441.1. AC093017 Genomic DNA. Translation: AAX95639.1. | |
| RefSeq | NP_001050993.1. |
| UniGene | Os.16873 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FGT based on UniProtKB P08170. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 4333821. |
| KEGG | osa:4333821. |
Organism-specific databases | |
| Gramene | Q7G794. |
Family and domain databases | |
| InterPro | IPR000907. LipOase. IPR013819. LipOase_C. IPR001024. LipOase_LH2. IPR001246. LipOase_pln. [Graphical view] |
| Gene3D | G3DSA:2.60.60.20. Lipase_LipOase. 1 hit. |
| PANTHER | PTHR11771. LipOase. 1 hit. |
| Pfam | PF00305. Lipoxygenase. 1 hit. PF01477. PLAT. 1 hit. [Graphical view] |
| PRINTS | PR00087. LIPOXYGENASE. PR00468. PLTLPOXGNASE. |
| SMART | SM00308. LH2. 1 hit. [Graphical view] |
| PROSITE | PS00711. LIPOXYGENASE_1. 1 hit. PS00081. LIPOXYGENASE_2. 1 hit. PS51393. LIPOXYGENASE_3. 1 hit. PS50095. PLAT. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | LOX3_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q7G794 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |
