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Protein

Beta-galactosidase 13

Gene

Os10g0330600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei187Proton donorSequence analysis1
Active sitei259NucleophileSequence analysis1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 13 (EC:3.2.1.23)
Short name:
Lactase 13
Gene namesi
Ordered Locus Names:Os10g0330600, LOC_Os10g18400
ORF Names:OsJ_029894, OSJNAb0008A05.15, OSJNBb0008A05.25
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000029416524 – 828Beta-galactosidase 13Add BLAST805

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi157N-linked (GlcNAc...)Sequence analysis1
Glycosylationi198N-linked (GlcNAc...)Sequence analysis1
Glycosylationi249N-linked (GlcNAc...)Sequence analysis1
Glycosylationi260N-linked (GlcNAc...)Sequence analysis1
Glycosylationi362N-linked (GlcNAc...)Sequence analysis1
Glycosylationi366N-linked (GlcNAc...)Sequence analysis1
Glycosylationi392N-linked (GlcNAc...)Sequence analysis1
Glycosylationi502N-linked (GlcNAc...)Sequence analysis1
Glycosylationi578N-linked (GlcNAc...)Sequence analysis1
Glycosylationi586N-linked (GlcNAc...)Sequence analysis1
Glycosylationi615N-linked (GlcNAc...)Sequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ7G3T8.
PRIDEiQ7G3T8.

Expressioni

Gene expression databases

GenevisibleiQ7G3T8. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g18400.1.

Structurei

3D structure databases

ProteinModelPortaliQ7G3T8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini746 – 828SUEL-type lectinPROSITE-ProRule annotationAdd BLAST83

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.Curated
Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
HOGENOMiHOG000239919.
InParanoidiQ7G3T8.
OMAiVKKANMV.
OrthoDBiEOG093601RS.

Family and domain databases

Gene3Di2.60.120.260. 3 hits.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 2 hits.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7G3T8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTTMAAAAT CLVALLVVVL AEAAGVGCTT VAYNDRSLVI DGERRIIISG
60 70 80 90 100
SIHYPRSTPE MWPDLIKKAK EGGLDAIETY VFWNGHEPHR RQYNFEGNYD
110 120 130 140 150
IIRFFKEIQN AGLYAILRIG PYICGEWNYG GLPAWLRDIP QMQFRMHNAP
160 170 180 190 200
FENEMENFTT LIINKMKDAN MFAGQGGPII LAQIENEYGN VMGQLNNNQS
210 220 230 240 250
ASEYIHWCAD MANKQNVGVP WIMCQQDSDV PHNVVNTCNG FYCHDWFPNR
260 270 280 290 300
TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY
310 320 330 340 350
HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK DLHSVIKSIE
360 370 380 390 400
KILVHGEYVD ANYSDNVTVT KYTLGSTSAC FINNRNDNKD LNVTLDGNTH
410 420 430 440 450
LLPAWSVSIL PDCKTVAFNS AKIKAQTTIM VKKANMVEKE PESLKWSWMR
460 470 480 490 500
ENLTPFMTDE KGSYRKNELL EQIVTSTDQS DYLWYRTSLD HKGEASYTLF
510 520 530 540 550
VNTTGHELYA FVNGMLVGKN HSPNGHFVFQ LESAVKLHDG KNYISLLSAT
560 570 580 590 600
IGLKNYGPLF EKMPAGIVGG PVKLIDNNGT GIDLSNSSWS YKAGLAGEYR
610 620 630 640 650
QIHLDKPGYR WDNNNGTVPI NRPFTWYKTT FQAPAGQDTV VVDLLGLNKG
660 670 680 690 700
VAWVNGNNLG RYWPSYTAAE MGGCHHCDYR GVFQAEGDGQ KCLTGCGEPS
710 720 730 740 750
QRYYHVPRSF LKNGEPNTLI LFEEAGGDPS QVIFHSVVAG SVCVSAEVGD
760 770 780 790 800
AITLSCGQHS KTISTIDVTS FGVARGQCGA YEGGCESKAA YKAFTEACLG
810 820
KESCTVQIIN ALTGSGCLSG VLTVQASC
Length:828
Mass (Da):92,000
Last modified:August 22, 2006 - v1
Checksum:iC0DE893C51D7D2B8
GO

Sequence cautioni

The sequence AAL31090 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAN04162 differs from that shown. Reason: Erroneous initiation.Curated
The sequence EAZ15685 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti420S → N in AK119350 (PubMed:12869764).Curated1
Sequence conflicti521H → R in AK119350 (PubMed:12869764).Curated1
Sequence conflicti817C → G in EAZ15685 (PubMed:15685292).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091749 Genomic DNA. Translation: AAL31090.1. Different initiation.
AC131374 Genomic DNA. Translation: AAN04162.1. Different initiation.
DP000086 Genomic DNA. Translation: AAP53027.2.
AP008216 Genomic DNA. Translation: BAF26280.1.
AP014966 Genomic DNA. Translation: BAT10359.1.
CM000147 Genomic DNA. Translation: EAZ15685.1. Different initiation.
AK119350 mRNA. No translation available.
RefSeqiXP_015613802.1. XM_015758316.1.
UniGeneiOs.46702.

Genome annotation databases

EnsemblPlantsiOS10T0330600-01; OS10T0330600-01; OS10G0330600.
GeneIDi4348337.
GrameneiOS10T0330600-01; OS10T0330600-01; OS10G0330600.
KEGGiosa:4348337.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091749 Genomic DNA. Translation: AAL31090.1. Different initiation.
AC131374 Genomic DNA. Translation: AAN04162.1. Different initiation.
DP000086 Genomic DNA. Translation: AAP53027.2.
AP008216 Genomic DNA. Translation: BAF26280.1.
AP014966 Genomic DNA. Translation: BAT10359.1.
CM000147 Genomic DNA. Translation: EAZ15685.1. Different initiation.
AK119350 mRNA. No translation available.
RefSeqiXP_015613802.1. XM_015758316.1.
UniGeneiOs.46702.

3D structure databases

ProteinModelPortaliQ7G3T8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os10g18400.1.

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Proteomic databases

PaxDbiQ7G3T8.
PRIDEiQ7G3T8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS10T0330600-01; OS10T0330600-01; OS10G0330600.
GeneIDi4348337.
GrameneiOS10T0330600-01; OS10T0330600-01; OS10G0330600.
KEGGiosa:4348337.

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
HOGENOMiHOG000239919.
InParanoidiQ7G3T8.
OMAiVKKANMV.
OrthoDBiEOG093601RS.

Gene expression databases

GenevisibleiQ7G3T8. OS.

Family and domain databases

Gene3Di2.60.120.260. 3 hits.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 2 hits.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiBGA13_ORYSJ
AccessioniPrimary (citable) accession number: Q7G3T8
Secondary accession number(s): A0A0P0XTB2
, A3C3M2, Q7G642, Q8W5D6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: August 22, 2006
Last modified: November 30, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.