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Q7G3T8

- BGA13_ORYSJ

UniProt

Q7G3T8 - BGA13_ORYSJ

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Protein

Beta-galactosidase 13

Gene
Os10g0330600, LOC_Os10g18400, OsJ_029894, OSJNAb0008A05.15, OSJNBb0008A05.25
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei187 – 1871Proton donor Reviewed prediction
Active sitei259 – 2591Nucleophile Reviewed prediction

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 13 (EC:3.2.1.23)
Short name:
Lactase 13
Gene namesi
Ordered Locus Names:Os10g0330600, LOC_Os10g18400
ORF Names:OsJ_029894, OSJNAb0008A05.15, OSJNBb0008A05.25
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 10

Organism-specific databases

GrameneiQ7G3T8.

Subcellular locationi

Secretedextracellular spaceapoplast Reviewed prediction

GO - Cellular componenti

  1. apoplast Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323 Reviewed predictionAdd
BLAST
Chaini24 – 828805Beta-galactosidase 13PRO_0000294165Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi157 – 1571N-linked (GlcNAc...) Reviewed prediction
Glycosylationi198 – 1981N-linked (GlcNAc...) Reviewed prediction
Glycosylationi249 – 2491N-linked (GlcNAc...) Reviewed prediction
Glycosylationi260 – 2601N-linked (GlcNAc...) Reviewed prediction
Glycosylationi362 – 3621N-linked (GlcNAc...) Reviewed prediction
Glycosylationi366 – 3661N-linked (GlcNAc...) Reviewed prediction
Glycosylationi392 – 3921N-linked (GlcNAc...) Reviewed prediction
Glycosylationi502 – 5021N-linked (GlcNAc...) Reviewed prediction
Glycosylationi578 – 5781N-linked (GlcNAc...) Reviewed prediction
Glycosylationi586 – 5861N-linked (GlcNAc...) Reviewed prediction
Glycosylationi615 – 6151N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ7G3T8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini746 – 82883SUEL-type lectinAdd
BLAST

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1874.
HOGENOMiHOG000239919.
OMAiSCFATEV.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7G3T8-1 [UniParc]FASTAAdd to Basket

« Hide

MKTTMAAAAT CLVALLVVVL AEAAGVGCTT VAYNDRSLVI DGERRIIISG    50
SIHYPRSTPE MWPDLIKKAK EGGLDAIETY VFWNGHEPHR RQYNFEGNYD 100
IIRFFKEIQN AGLYAILRIG PYICGEWNYG GLPAWLRDIP QMQFRMHNAP 150
FENEMENFTT LIINKMKDAN MFAGQGGPII LAQIENEYGN VMGQLNNNQS 200
ASEYIHWCAD MANKQNVGVP WIMCQQDSDV PHNVVNTCNG FYCHDWFPNR 250
TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY 300
HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK DLHSVIKSIE 350
KILVHGEYVD ANYSDNVTVT KYTLGSTSAC FINNRNDNKD LNVTLDGNTH 400
LLPAWSVSIL PDCKTVAFNS AKIKAQTTIM VKKANMVEKE PESLKWSWMR 450
ENLTPFMTDE KGSYRKNELL EQIVTSTDQS DYLWYRTSLD HKGEASYTLF 500
VNTTGHELYA FVNGMLVGKN HSPNGHFVFQ LESAVKLHDG KNYISLLSAT 550
IGLKNYGPLF EKMPAGIVGG PVKLIDNNGT GIDLSNSSWS YKAGLAGEYR 600
QIHLDKPGYR WDNNNGTVPI NRPFTWYKTT FQAPAGQDTV VVDLLGLNKG 650
VAWVNGNNLG RYWPSYTAAE MGGCHHCDYR GVFQAEGDGQ KCLTGCGEPS 700
QRYYHVPRSF LKNGEPNTLI LFEEAGGDPS QVIFHSVVAG SVCVSAEVGD 750
AITLSCGQHS KTISTIDVTS FGVARGQCGA YEGGCESKAA YKAFTEACLG 800
KESCTVQIIN ALTGSGCLSG VLTVQASC 828
Length:828
Mass (Da):92,000
Last modified:August 22, 2006 - v1
Checksum:iC0DE893C51D7D2B8
GO

Sequence cautioni

The sequence AAL31090.1 differs from that shown. Reason: Erroneous initiation.
The sequence AAN04162.1 differs from that shown. Reason: Erroneous initiation.
The sequence EAZ15685.1 differs from that shown. Reason: Erroneous initiation.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti420 – 4201S → N in AK119350. 1 Publication
Sequence conflicti521 – 5211H → R in AK119350. 1 Publication
Sequence conflicti817 – 8171C → G in EAZ15685. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC091749 Genomic DNA. Translation: AAL31090.1. Different initiation.
AC131374 Genomic DNA. Translation: AAN04162.1. Different initiation.
DP000086 Genomic DNA. Translation: AAP53027.2.
AP008216 Genomic DNA. Translation: BAF26280.1.
CM000147 Genomic DNA. Translation: EAZ15685.1. Different initiation.
AK119350 mRNA. No translation available.
RefSeqiNP_001064366.1. NM_001070901.1.
UniGeneiOs.46702.

Genome annotation databases

EnsemblPlantsiOS10T0330600-01; OS10T0330600-01; OS10G0330600.
GeneIDi4348337.
KEGGiosa:4348337.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC091749 Genomic DNA. Translation: AAL31090.1 . Different initiation.
AC131374 Genomic DNA. Translation: AAN04162.1 . Different initiation.
DP000086 Genomic DNA. Translation: AAP53027.2 .
AP008216 Genomic DNA. Translation: BAF26280.1 .
CM000147 Genomic DNA. Translation: EAZ15685.1 . Different initiation.
AK119350 mRNA. No translation available.
RefSeqi NP_001064366.1. NM_001070901.1.
UniGenei Os.46702.

3D structure databases

ProteinModelPortali Q7G3T8.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH35. Glycoside Hydrolase Family 35.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS10T0330600-01 ; OS10T0330600-01 ; OS10G0330600 .
GeneIDi 4348337.
KEGGi osa:4348337.

Organism-specific databases

Gramenei Q7G3T8.

Phylogenomic databases

eggNOGi COG1874.
HOGENOMi HOG000239919.
OMAi SCFATEV.

Family and domain databases

Gene3Di 2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProi IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view ]
PANTHERi PTHR23421. PTHR23421. 1 hit.
Pfami PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view ]
PRINTSi PR00742. GLHYDRLASE35.
SUPFAMi SSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "In-depth view of structure, activity, and evolution of rice chromosome 10."
    Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.
    , Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R., Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.
    Science 300:1566-1569(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBGA13_ORYSJ
AccessioniPrimary (citable) accession number: Q7G3T8
Secondary accession number(s): A3C3M2, Q7G642, Q8W5D6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: August 22, 2006
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi