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Q7F9K4

- BGL10_ORYSJ

UniProt

Q7F9K4 - BGL10_ORYSJ

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Protein

Beta-glucosidase 10

Gene

BGLU10

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei53 – 531SubstrateBy similarity
Binding sitei157 – 1571SubstrateBy similarity
Binding sitei202 – 2021SubstrateBy similarity
Active sitei203 – 2031Proton donorBy similarity
Binding sitei369 – 3691SubstrateBy similarity
Active sitei440 – 4401NucleophileBy similarity
Binding sitei489 – 4891SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 10 (EC:3.2.1.21)
Short name:
Os4bglu10
Gene namesi
Name:BGLU10
Ordered Locus Names:Os04g0474500, LOC_Os04g39840
ORF Names:OsJ_17051, OSJNBa0022H21.1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7F9K4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence AnalysisAdd
BLAST
Chaini24 – 533510Beta-glucosidase 10PRO_0000390327Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi122 – 1221N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi222 ↔ 230By similarity
Glycosylationi384 – 3841N-linked (GlcNAc...)Sequence Analysis
Glycosylationi448 – 4481N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ7F9K4.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os04g39840.1.

Structurei

3D structure databases

ProteinModelPortaliQ7F9K4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni496 – 4972Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ7F9K4.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7F9K4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVAGAMVMS GGVLLLLLAF TCAAYNDAGE LPPISRRSFP KGFIFGTSSS
60 70 80 90 100
SYQFEGAAAK GGRGPSIWDT FTHQYPDKIT DKSNGDGACN SYHLYKEDVR
110 120 130 140 150
IMKEMGMDAY RFSISWSRIL PNGSLSGGVN REGINYYNNL INELLSKEVQ
160 170 180 190 200
PFATLFHFDT PQALEDKYKG FLSPNIINDY KDYAEICFKE FGDRVKHWIT
210 220 230 240 250
FNEPWNFCSM GYASGTMAPG RCSSWEKGKC RVGDSGREPY TACHHQLLAH
260 270 280 290 300
AETVRLYKEK YQFTEEAIRQ SPFIRDNNLN RRSAKALQKG RIGIILNSEW
310 320 330 340 350
FVPFSQSKSS NDAARRVLDF MLGWFMDPLI RGDYPLSMRE LVGNRLPEFS
360 370 380 390 400
KEQSEMVKGA FDFIGLNYYA SSYADNDPPS YGHNNSYNTD SHAKITGSRN
410 420 430 440 450
GIPIGPQAAS FWFYIYPEGL RELLLHIKEN YGNPTIYITE NGVDEINNKT
460 470 480 490 500
MRLKEALKDD IRIEYYHKHL LALLSAMRDG ANVKGYFAWS LLDNFEWSEG
510 520 530
YTVRFGINFV DYDNGMKRYP KNSARWFKKF LRK
Length:533
Mass (Da):60,853
Last modified:July 5, 2004 - v1
Checksum:iF39FA09D795986C8
GO

Sequence cautioni

The sequence BAF14981.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL731582 Genomic DNA. Translation: CAE05481.2.
AP008210 Genomic DNA. Translation: BAF14981.1. Sequence problems.
CM000142 Genomic DNA. Translation: EEE62264.1.
AK065793 mRNA. No translation available.
RefSeqiNP_001053067.1. NM_001059602.1.
UniGeneiOs.10324.

Genome annotation databases

GeneIDi4336142.
KEGGiosa:4336142.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL731582 Genomic DNA. Translation: CAE05481.2 .
AP008210 Genomic DNA. Translation: BAF14981.1 . Sequence problems.
CM000142 Genomic DNA. Translation: EEE62264.1 .
AK065793 mRNA. No translation available.
RefSeqi NP_001053067.1. NM_001059602.1.
UniGenei Os.10324.

3D structure databases

ProteinModelPortali Q7F9K4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os04g39840.1.

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEi Q7F9K4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4336142.
KEGGi osa:4336142.

Organism-specific databases

Gramenei Q7F9K4.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
InParanoidi Q7F9K4.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  6. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL10_ORYSJ
AccessioniPrimary (citable) accession number: Q7F9K4
Secondary accession number(s): Q0JCF6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3