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Protein

BURP domain-containing protein 13

Gene

BURP13

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Required for pollen development. Probably synthesized in the tapetum, packaged in Ubisch bodies and transported at appropriate stages to the micropsores.1 Publication

GO - Biological processi

  • pollen development Source: UniProtKB

Names & Taxonomyi

Protein namesi
Recommended name:
BURP domain-containing protein 13
Short name:
OsBURP13
Alternative name(s):
Protein RAFTIN 1
Short name:
OsRAFTIN1
Gene namesi
Name:BURP13
Synonyms:RAFTIN1
Ordered Locus Names:Os08g0496800, LOC_Os08g38810
ORF Names:B1142B04.37, P0026F07.8
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  • exine Source: UniProtKB

Pathology & Biotechi

Disruption phenotypei

Collapsed pollen with low viability. Almost no seed production.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000037584024 – 412BURP domain-containing protein 13Add BLAST389

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi369N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ7F8U7.
PRIDEiQ7F8U7.

Expressioni

Tissue specificityi

Specifically expressed in anthers, in the tapetum and microspores (at protein level).2 Publications

Gene expression databases

GenevisibleiQ7F8U7. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g38810.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini190 – 406BURPPROSITE-ProRule annotationAdd BLAST217

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi110 – 116Poly-Gly7

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410JW3M. Eukaryota.
ENOG41105AW. LUCA.
HOGENOMiHOG000238251.
InParanoidiQ7F8U7.
OMAiPFGYDYK.
OrthoDBiEOG09360FAI.

Family and domain databases

InterProiView protein in InterPro
IPR004873. BURP_dom.
PfamiView protein in Pfam
PF03181. BURP. 1 hit.
SMARTiView protein in SMART
SM01045. BURP. 1 hit.
PROSITEiView protein in PROSITE
PS51277. BURP. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7F8U7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARFLLLLVA VAAAAAVLSL GDAAPSTAEV FWRAVLPESP LPDAFLRLLR
60 70 80 90 100
PDTSFVVGKA EAAGGAARTG FPFDYTDYRG SDSPTTASGL DLAGDFGEPA
110 120 130 140 150
PFGYDYSAQG EGGGGGAAAA AGEQVLAVDA GFNYDKYVGA RKLRGGSSTA
160 170 180 190 200
GGENDDEPFG YDYKAPSSGS GTAASTTARG VGTGATTTVF FHEEAVRVGE
210 220 230 240 250
RLPFYFPAAT TSALGFLPRR VADSIPFTAA ALPAVLALFG VAPDTAEAAG
260 270 280 290 300
MRETLRTCEW PTLAGESKFC ATSLEALVEG AMAALGTRDI AALASTLPRG
310 320 330 340 350
GAPLQAYAVR AVLPVEGAGF VACHDQAYPY TVYRCHTTGP ARAYMVEMEG
360 370 380 390 400
DGGGDGGEAV TVATVCHTNT SRWNPEHVSF KLLGTKPGGS PVCHLMPYGH
410
IVWAKNVKSS TA
Length:412
Mass (Da):42,330
Last modified:July 5, 2004 - v1
Checksum:i8E1E94BD1D4F3155
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ575667 mRNA. Translation: CAE02617.1.
AJ575668 Genomic DNA. Translation: CAE02618.1.
AP000364 Genomic DNA. Translation: BAD08707.1.
AP005148 Genomic DNA. Translation: BAD10134.1.
AP008214 Genomic DNA. Translation: BAF24051.1.
AP014964 Genomic DNA. Translation: BAT06071.1.
RefSeqiXP_015649559.1. XM_015794073.1.
UniGeneiOs.49777.

Genome annotation databases

EnsemblPlantsiOS08T0496800-01; OS08T0496800-01; OS08G0496800.
GeneIDi4345929.
GrameneiOS08T0496800-01; OS08T0496800-01; OS08G0496800.
KEGGiosa:4345929.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiBURPD_ORYSJ
AccessioniPrimary (citable) accession number: Q7F8U7
Secondary accession number(s): A0A0P0XHH8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: July 5, 2004
Last modified: May 10, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations