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Q7EXZ4 (BGL28_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 28

Short name=Os8bglu28
EC=3.2.1.21
Gene names
Name:BGLU28
Ordered Locus Names:Os08g0509400, LOC_Os08g39870
ORF Names:B1168A08.31, OSJNBa0016N23.106
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence BAF24116.2 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential
Chain25 – 500476Beta-glucosidase 28
PRO_0000390345

Regions

Region464 – 4652Substrate binding By similarity

Sites

Active site1921Proton donor By similarity
Active site4081Nucleophile By similarity
Binding site451Substrate By similarity
Binding site1461Substrate By similarity
Binding site1911Substrate By similarity
Binding site3371Substrate By similarity
Binding site4571Substrate By similarity

Amino acid modifications

Glycosylation1111N-linked (GlcNAc...) Potential
Glycosylation3621N-linked (GlcNAc...) Potential
Glycosylation4091N-linked (GlcNAc...) Potential
Glycosylation4151N-linked (GlcNAc...) Potential
Glycosylation4161N-linked (GlcNAc...) Potential
Disulfide bond211 ↔ 219 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7EXZ4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: DFD5BF81DBA8CCD8

FASTA50056,559
        10         20         30         40         50         60 
MDRRLLLSAL LFIALACSSN RVHGALNRHS FPEGFLFGTG TSAYQYEGAV DKRGQNIWDT 

        70         80         90        100        110        120 
FSRIPGKIAD GSNADIANDF YHRYKEDLNL ITAMNMDSFR FSIAWSRILP NGTISGGINK 

       130        140        150        160        170        180 
EGVEFYNSLI NEVIAKGLKP FVTIFHFDTP QALEDKYGGF LSENIVKDYV DYADLCFSLF 

       190        200        210        220        230        240 
GDRVKLWNTF NEPTIFCMNG YATGIMAPGR CSPYASASCA AGGDSGREPY VAGHHLLVAH 

       250        260        270        280        290        300 
AEAVRLYRAR YRAAHGGEVG ITQVSHWFEP YDAGSAADRR ARRRALDFML GWFMHPVAHG 

       310        320        330        340        350        360 
EYPPAMRRLV GGRLPAFTAE QSEMLRGSFD FIGLNYYTSN YAVAAPPPNK LHPSYLTDNW 

       370        380        390        400        410        420 
VNATGYRNSI PIGPPAYTPI FFNYPPGLRE LLLYVKRRYN NPTIYITENG TDEANNSTIP 

       430        440        450        460        470        480 
ISEALKDETR IGFHYKHLQF VHKAIQEGVK VKGYFTWTFM DCFEFGDGFK DRFGLIYVDR 

       490        500 
ATLARFRKKS SYWFADFLRR 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[4]"Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP005816 Genomic DNA. Translation: BAD10672.1.
AP006049 Genomic DNA. Translation: BAD10731.1.
AP008214 Genomic DNA. Translation: BAF24116.2. Different initiation.
AK105908 mRNA. Translation: BAG97431.1.
RefSeqNP_001062202.2. NM_001068737.1.
UniGeneOs.7762.

3D structure databases

ProteinModelPortalQ7EXZ4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS08T0509400-01; OS08T0509400-01; OS08G0509400.
GeneID4345996.
KEGGosa:4345996.

Organism-specific databases

GrameneQ7EXZ4.

Phylogenomic databases

eggNOGCOG2723.
OMAYQFVASA.
ProtClustDBCLSN2697464.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL28_ORYSJ
AccessionPrimary (citable) accession number: Q7EXZ4
Secondary accession number(s): Q0J4J9
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries