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Q7EXZ4

- BGL28_ORYSJ

UniProt

Q7EXZ4 - BGL28_ORYSJ

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Protein

Beta-glucosidase 28

Gene

BGLU28

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei45 – 451SubstrateBy similarity
Binding sitei146 – 1461SubstrateBy similarity
Binding sitei191 – 1911SubstrateBy similarity
Active sitei192 – 1921Proton donorBy similarity
Binding sitei337 – 3371SubstrateBy similarity
Active sitei408 – 4081NucleophileBy similarity
Binding sitei457 – 4571SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 28 (EC:3.2.1.21)
Short name:
Os8bglu28
Gene namesi
Name:BGLU28
Ordered Locus Names:Os08g0509400, LOC_Os08g39870
ORF Names:B1168A08.31, OSJNBa0016N23.106
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ7EXZ4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence AnalysisAdd
BLAST
Chaini25 – 500476Beta-glucosidase 28PRO_0000390345Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi211 ↔ 219By similarity
Glycosylationi362 – 3621N-linked (GlcNAc...)Sequence Analysis
Glycosylationi409 – 4091N-linked (GlcNAc...)Sequence Analysis
Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis
Glycosylationi416 – 4161N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ7EXZ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni464 – 4652Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
InParanoidiQ7EXZ4.
KOiK01188.
OMAiWFMHPVA.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7EXZ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDRRLLLSAL LFIALACSSN RVHGALNRHS FPEGFLFGTG TSAYQYEGAV
60 70 80 90 100
DKRGQNIWDT FSRIPGKIAD GSNADIANDF YHRYKEDLNL ITAMNMDSFR
110 120 130 140 150
FSIAWSRILP NGTISGGINK EGVEFYNSLI NEVIAKGLKP FVTIFHFDTP
160 170 180 190 200
QALEDKYGGF LSENIVKDYV DYADLCFSLF GDRVKLWNTF NEPTIFCMNG
210 220 230 240 250
YATGIMAPGR CSPYASASCA AGGDSGREPY VAGHHLLVAH AEAVRLYRAR
260 270 280 290 300
YRAAHGGEVG ITQVSHWFEP YDAGSAADRR ARRRALDFML GWFMHPVAHG
310 320 330 340 350
EYPPAMRRLV GGRLPAFTAE QSEMLRGSFD FIGLNYYTSN YAVAAPPPNK
360 370 380 390 400
LHPSYLTDNW VNATGYRNSI PIGPPAYTPI FFNYPPGLRE LLLYVKRRYN
410 420 430 440 450
NPTIYITENG TDEANNSTIP ISEALKDETR IGFHYKHLQF VHKAIQEGVK
460 470 480 490 500
VKGYFTWTFM DCFEFGDGFK DRFGLIYVDR ATLARFRKKS SYWFADFLRR
Length:500
Mass (Da):56,559
Last modified:July 5, 2004 - v1
Checksum:iDFD5BF81DBA8CCD8
GO

Sequence cautioni

The sequence BAF24116.2 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005816 Genomic DNA. Translation: BAD10672.1.
AP006049 Genomic DNA. Translation: BAD10731.1.
AP008214 Genomic DNA. Translation: BAF24116.2. Different initiation.
AK105908 mRNA. Translation: BAG97431.1.
RefSeqiNP_001062202.2. NM_001068737.1.
UniGeneiOs.7762.

Genome annotation databases

EnsemblPlantsiOS08T0509400-01; OS08T0509400-01; OS08G0509400.
GeneIDi4345996.
KEGGiosa:4345996.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005816 Genomic DNA. Translation: BAD10672.1 .
AP006049 Genomic DNA. Translation: BAD10731.1 .
AP008214 Genomic DNA. Translation: BAF24116.2 . Different initiation.
AK105908 mRNA. Translation: BAG97431.1 .
RefSeqi NP_001062202.2. NM_001068737.1.
UniGenei Os.7762.

3D structure databases

ProteinModelPortali Q7EXZ4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0509400-01 ; OS08T0509400-01 ; OS08G0509400 .
GeneIDi 4345996.
KEGGi osa:4345996.

Organism-specific databases

Gramenei Q7EXZ4.

Phylogenomic databases

eggNOGi COG2723.
InParanoidi Q7EXZ4.
KOi K01188.
OMAi WFMHPVA.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL28_ORYSJ
AccessioniPrimary (citable) accession number: Q7EXZ4
Secondary accession number(s): Q0J4J9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3