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Q7EXZ4

- BGL28_ORYSJ

UniProt

Q7EXZ4 - BGL28_ORYSJ

Protein

Beta-glucosidase 28

Gene

BGLU28

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei45 – 451SubstrateBy similarity
    Binding sitei146 – 1461SubstrateBy similarity
    Binding sitei191 – 1911SubstrateBy similarity
    Active sitei192 – 1921Proton donorBy similarity
    Binding sitei337 – 3371SubstrateBy similarity
    Active sitei408 – 4081NucleophileBy similarity
    Binding sitei457 – 4571SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 28 (EC:3.2.1.21)
    Short name:
    Os8bglu28
    Gene namesi
    Name:BGLU28
    Ordered Locus Names:Os08g0509400, LOC_Os08g39870
    ORF Names:B1168A08.31, OSJNBa0016N23.106
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiQ7EXZ4.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424Sequence AnalysisAdd
    BLAST
    Chaini25 – 500476Beta-glucosidase 28PRO_0000390345Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi211 ↔ 219By similarity
    Glycosylationi362 – 3621N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi409 – 4091N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi416 – 4161N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Structurei

    3D structure databases

    ProteinModelPortaliQ7EXZ4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni464 – 4652Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    KOiK01188.
    OMAiWFMHPVA.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q7EXZ4-1 [UniParc]FASTAAdd to Basket

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    MDRRLLLSAL LFIALACSSN RVHGALNRHS FPEGFLFGTG TSAYQYEGAV    50
    DKRGQNIWDT FSRIPGKIAD GSNADIANDF YHRYKEDLNL ITAMNMDSFR 100
    FSIAWSRILP NGTISGGINK EGVEFYNSLI NEVIAKGLKP FVTIFHFDTP 150
    QALEDKYGGF LSENIVKDYV DYADLCFSLF GDRVKLWNTF NEPTIFCMNG 200
    YATGIMAPGR CSPYASASCA AGGDSGREPY VAGHHLLVAH AEAVRLYRAR 250
    YRAAHGGEVG ITQVSHWFEP YDAGSAADRR ARRRALDFML GWFMHPVAHG 300
    EYPPAMRRLV GGRLPAFTAE QSEMLRGSFD FIGLNYYTSN YAVAAPPPNK 350
    LHPSYLTDNW VNATGYRNSI PIGPPAYTPI FFNYPPGLRE LLLYVKRRYN 400
    NPTIYITENG TDEANNSTIP ISEALKDETR IGFHYKHLQF VHKAIQEGVK 450
    VKGYFTWTFM DCFEFGDGFK DRFGLIYVDR ATLARFRKKS SYWFADFLRR 500
    Length:500
    Mass (Da):56,559
    Last modified:July 5, 2004 - v1
    Checksum:iDFD5BF81DBA8CCD8
    GO

    Sequence cautioni

    The sequence BAF24116.2 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005816 Genomic DNA. Translation: BAD10672.1.
    AP006049 Genomic DNA. Translation: BAD10731.1.
    AP008214 Genomic DNA. Translation: BAF24116.2. Different initiation.
    AK105908 mRNA. Translation: BAG97431.1.
    RefSeqiNP_001062202.2. NM_001068737.1.
    UniGeneiOs.7762.

    Genome annotation databases

    EnsemblPlantsiOS08T0509400-01; OS08T0509400-01; OS08G0509400.
    GeneIDi4345996.
    KEGGiosa:4345996.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005816 Genomic DNA. Translation: BAD10672.1 .
    AP006049 Genomic DNA. Translation: BAD10731.1 .
    AP008214 Genomic DNA. Translation: BAF24116.2 . Different initiation.
    AK105908 mRNA. Translation: BAG97431.1 .
    RefSeqi NP_001062202.2. NM_001068737.1.
    UniGenei Os.7762.

    3D structure databases

    ProteinModelPortali Q7EXZ4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0509400-01 ; OS08T0509400-01 ; OS08G0509400 .
    GeneIDi 4345996.
    KEGGi osa:4345996.

    Organism-specific databases

    Gramenei Q7EXZ4.

    Phylogenomic databases

    eggNOGi COG2723.
    KOi K01188.
    OMAi WFMHPVA.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL28_ORYSJ
    AccessioniPrimary (citable) accession number: Q7EXZ4
    Secondary accession number(s): Q0J4J9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3