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Protein

Squamosa promoter-binding-like protein 14

Gene

SPL14

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi104Zinc 1By similarity1
Metal bindingi109Zinc 1By similarity1
Metal bindingi126Zinc 1By similarity1
Metal bindingi129Zinc 1By similarity1
Metal bindingi145Zinc 2By similarity1
Metal bindingi148Zinc 2By similarity1
Metal bindingi152Zinc 2By similarity1
Metal bindingi164Zinc 2By similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri101 – 178SBP-typePROSITE-ProRule annotationAdd BLAST78

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Squamosa promoter-binding-like protein 14
Gene namesi
Name:SPL14
Ordered Locus Names:Os08g0509600, LOC_Os08g39890
ORF Names:B1168A08.33, OSJNBa0016N23.108
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003082411 – 417Squamosa promoter-binding-like protein 14Add BLAST417

Proteomic databases

PaxDbiQ7EXZ2.

Expressioni

Tissue specificityi

Expressed in young panicles.1 Publication

Inductioni

Negatively regulated by microRNAs miR156b and miR156h.1 Publication

Gene expression databases

GenevisibleiQ7EXZ2. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g39890.1.

Structurei

3D structure databases

ProteinModelPortaliQ7EXZ2.
SMRiQ7EXZ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi161 – 177Bipartite nuclear localization signalSequence analysisAdd BLAST17

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi6 – 89Gly-richAdd BLAST84

Domaini

The SBP-type zinc finger is required for the binding to DNA.By similarity

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri101 – 178SBP-typePROSITE-ProRule annotationAdd BLAST78

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IJWK. Eukaryota.
ENOG410YVZE. LUCA.
HOGENOMiHOG000070804.
InParanoidiQ7EXZ2.
OMAiPWTGSRG.
OrthoDBiEOG09360FJT.

Family and domain databases

Gene3Di4.10.1100.10. 1 hit.
InterProiView protein in InterPro
IPR004333. Transcpt_factor_SBP-box.
PfamiView protein in Pfam
PF03110. SBP. 1 hit.
SUPFAMiSSF103612. SSF103612. 1 hit.
PROSITEiView protein in PROSITE
PS51141. ZF_SBP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7EXZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEMASGGGAA AAAGGGVGGS GGGGGGGDEH RQLHGLKFGK KIYFEDAAAA
60 70 80 90 100
AGGGGTGSGS GSASAAPPSS SSKAAGGGRG GGGKNKGKGV AAAAPPPPPP
110 120 130 140 150
PPRCQVEGCG ADLSGIKNYY CRHKVCFMHS KAPRVVVAGL EQRFCQQCSR
160 170 180 190 200
FHLLPEFDQG KRSCRRRLAG HNERRRRPQT PLASRYGRLA ASVGEHRRFR
210 220 230 240 250
SFTLDFSYPR VPSSVRNAWP AIQPGDRISG GIQWHRNVAP HGHSSAVAGY
260 270 280 290 300
GANTYSGQGS SSSGPPVFAG PNLPPGGCLA GVGAATDSSC ALSLLSTQPW
310 320 330 340 350
DTTTHSAAAS HNQAAAMSTT TSFDGNPVAP SAMAGSYMAP SPWTGSRGHE
360 370 380 390 400
GGGRSVAHQL PHEVSLDEVH PGPSHHAHFS GELELALQGN GPAPAPRIDP
410
GSGSTFDQTS NTMDWSL
Length:417
Mass (Da):42,379
Last modified:July 5, 2004 - v1
Checksum:iDBEC3A9399C515C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005816 Genomic DNA. Translation: BAD10674.1.
AP006049 Genomic DNA. Translation: BAD10733.1.
AP008214 Genomic DNA. Translation: BAF24118.1.
AP014964 Genomic DNA. Translation: BAT06187.1.
AK107191 mRNA. Translation: BAG97990.1.
UniGeneiOs.6636.

Genome annotation databases

EnsemblPlantsiOS08T0509600-01; OS08T0509600-01; OS08G0509600.
GrameneiOS08T0509600-01; OS08T0509600-01; OS08G0509600.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiSPL14_ORYSJ
AccessioniPrimary (citable) accession number: Q7EXZ2
Secondary accession number(s): B7F043
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 23, 2007
Last sequence update: July 5, 2004
Last modified: February 15, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations