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Protein

Putative uncharacterized protein YghX

Gene

yghX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7556-MONOMER.
RETL1328306-WGS:GSTH-6232-MONOMER.

Protein family/group databases

ESTHERiecoli-yghX. Dienelactone_hydrolase.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YghX
Gene namesi
Name:yghX
Synonyms:yghY
Ordered Locus Names:b4658, JW5926/JW5496
ORF Names:b2999, b3000
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13008. yghX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 278278Putative uncharacterized protein YghXPRO_0000271888Add
BLAST

Proteomic databases

EPDiQ7DFU6.

Interactioni

Protein-protein interaction databases

IntActiQ7DFU6. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ7DFU6.
SMRiQ7DFU6. Positions 43-277.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000157121.
InParanoidiQ7DFU6.
OMAiWISNMMA.
PhylomeDBiQ7DFU6.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR002925. Dienelactn_hydro.
[Graphical view]
PfamiPF01738. DLH. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7DFU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTITLTGKSR NVSSSTLRRS AVGGMTALAL FDLLKPNYAL ATQVEFTDPE
60 70 80 90 100
IVAEYITYPS PNGHGEVRGY LVKPAKMSGK TPAVVVVHEN RGLNPYIEDV
110 120 130 140 150
ARRVAKAGYI ALAPDGLSSV GGYPGNDDKG RELQQQVDPT NLMNDFFAAI
160 170 180 190 200
EFMQRYPQAT GKVGITGFCY GGGVSNAAAV AYPELACAVP FYGRQAPTAD
210 220 230 240 250
VAKIEAPLLL HFAELDTRIN EGWPAYEAAL KANNKVYEAY IYPGVNHGFH
260 270
NDSTPRYDKS AADLAWQRTL KWFDKYLS
Length:278
Mass (Da):30,294
Last modified:January 9, 2007 - v3
Checksum:i7F5B5DE20547607D
GO

Sequence cautioni

The sequence AAA69166.1 differs from that shown. Reason: Frameshift at position 141. Curated
The sequence AP009048 differs from that shown. Reason: Frameshift at position 141. Curated
The sequence U00096 differs from that shown. Reason: Frameshift at position 141. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69166.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiE65086.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69166.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiE65086.

3D structure databases

ProteinModelPortaliQ7DFU6.
SMRiQ7DFU6. Positions 43-277.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ7DFU6. 1 interaction.

Protein family/group databases

ESTHERiecoli-yghX. Dienelactone_hydrolase.

Proteomic databases

EPDiQ7DFU6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EcoGeneiEG13008. yghX.

Phylogenomic databases

HOGENOMiHOG000157121.
InParanoidiQ7DFU6.
OMAiWISNMMA.
PhylomeDBiQ7DFU6.

Enzyme and pathway databases

BioCyciEcoCyc:G7556-MONOMER.
RETL1328306-WGS:GSTH-6232-MONOMER.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR002925. Dienelactn_hydro.
[Graphical view]
PfamiPF01738. DLH. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGHX_ECOLI
AccessioniPrimary (citable) accession number: Q7DFU6
Secondary accession number(s): Q46849, Q7DFU7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 9, 2007
Last modified: March 16, 2016
This is version 65 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.