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Q7D4Z2

- Q7D4Z2_MYCTO

UniProt

Q7D4Z2 - Q7D4Z2_MYCTO

Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

MT3836

Organism
Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigCImported
    Submitted name:
    DNA ligase, putativeImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:MT3836Imported
    ORF Names:V735_03874Imported
    OrganismiMycobacterium tuberculosis (strain CDC 1551 / Oshkosh)Imported
    Taxonomic identifieri83331 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000001020: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi83331.MT3836.

    Structurei

    3D structure databases

    SMRiQ7D4Z2. Positions 6-340.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7D4Z2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN    50
    ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE 100
    SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA 150
    DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI 200
    KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE 250
    RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 300
    LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL 350
    SDIVPGLR 358
    Length:358
    Mass (Da):40,141
    Last modified:July 5, 2004 - v1
    Checksum:i22DA33D1A56196BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000516 Genomic DNA. Translation: AAK48203.1.
    JLBH01000004 Genomic DNA. Translation: KBN09531.1.
    RefSeqiNP_338389.1. NC_002755.2.

    Genome annotation databases

    EnsemblBacteriaiAAK48203; AAK48203; MT3836.
    GeneIDi922662.
    KEGGimtc:MT3836.
    PATRICi18130197. VBIMycTub22151_4189.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000516 Genomic DNA. Translation: AAK48203.1 .
    JLBH01000004 Genomic DNA. Translation: KBN09531.1 .
    RefSeqi NP_338389.1. NC_002755.2.

    3D structure databases

    SMRi Q7D4Z2. Positions 6-340.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 83331.MT3836.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAK48203 ; AAK48203 ; MT3836 .
    GeneIDi 922662.
    KEGGi mtc:MT3836.
    PATRICi 18130197. VBIMycTub22151_4189.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OrthoDBi EOG63NMFT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CDC 1551 / OshkoshImported and CDC1551Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CDC1551.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Cdc1551Imported.

    Entry informationi

    Entry nameiQ7D4Z2_MYCTO
    AccessioniPrimary (citable) accession number: Q7D4Z2
    Secondary accession number(s): F2GFV3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3