Q7D1W5 (Q7D1W5_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysozyme EMBL AAK86049.2

Gene names

Ordered Locus Names:

Atu0233 EMBL AAK86049.2

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	365 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7D1W5 [UniParc]. Last modified January 15, 2008. Version 2. Checksum: BB92E3B0B06DE487	FASTA	365	40,970
	10 20 30 40 50 60 MRSSAVPALL FGCLLLGGCT SSSGPESLMA GLPSKETTSS VKPSAPVPQA SVGTQPITAQ 70 80 90 100 110 120 PRQEVLAWGG PVPDEPKAFS AVTPKASLPQ NAPEIRLPVP SQTGMVRPAE RPMERPVQLA 130 140 150 160 170 180 MAAAPAASAG AQIRSRIFRS SFSDAKPINF GRVQPRHFQV HGVDVSRWQA NIDWPQLRTR 190 200 210 220 230 240 GANFAFIKAT DGGDHLDPMF RTNWQRAKEA GIRRGAYHFF YWCRNASEQA DWFIRNVPRD 250 260 270 280 290 300 PDALPPVIDV EYNGESSCKM RHSRERVLEK MRVFMDKLER HYGQRPIIYT APDFYKDNLQ 310 320 330 340 350 360 GEFHDYPFWL RAVAQHPSAV YPGRKWLFWQ YSGSGLSHGV DGRIDLNVFN GSEESWHRWV DRRSS

References

[1]	"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.
[2]	"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007869 Genomic DNA. Translation: AAK86049.2.
RefSeq	NP_353264.2. NC_003062.2.
3D structure databases
ProteinModelPortal	Q7D1W5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7D1W5.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1132271.
GenomeReviews	Gene locus Atu0233 in contig AE007869_GR.
KEGG	atu:Atu0233.
PATRIC	20810147. VBIAgrTum91616_0223.
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	NGESSCK.
ProtClustDB	CLSK862917.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7D1W5_AGRT5

Accession

Primary (citable) accession number: Q7D1W5

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 44 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)