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Protein
Submitted name:

Alpha-amylase

Gene

amyA

Organism
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei235 – 2351NucleophileUniRule annotation
Active sitei265 – 2651Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAGRO:ATU3914-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:Atu3914Imported
OrganismiAgrobacterium tumefaciens (strain C58 / ATCC 33970)Imported
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
ProteomesiUP000000813 Componenti: Chromosome linear

Interactioni

Protein-protein interaction databases

STRINGi176299.Atu3914.

Structurei

3D structure databases

ProteinModelPortaliQ7CTL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7CTL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGRTLLQFF HWYYPDGGKL WSEVAEKAES LAKMGITDVW LPPAYKGAAG
60 70 80 90 100
GYSVGYDTYD LFDLGEFDQK GTVATKYGDR AALEHAGKTL KDNGIRVIHD
110 120 130 140 150
VVLNHKMGAD EKEKVRVRRV NPDDRTDIDD EDFPALAYTR FTFPGRNGKH
160 170 180 190 200
SKFIWDLKCF SGVDHIEEPT EDGIFRLVNE YGDGEWNEEV DQENGNFDYL
210 220 230 240 250
MGADVEFRNR AVYEELKYWG RWLSEQVQVD GFRLDAAKHI PAWFFRDWVG
260 270 280 290 300
HMRETVDPDL FVVAEYWHPD LEALKSYLEL VDKQLMLFDV ALHHSFHDAS
310 320 330 340 350
KQGGDFDMRS IFDGSLVSAV PDHAVTLVDN HDTQPLQSLE APVEPWFKPL
360 370 380 390 400
AYAIILLREE GVPCVFYPDL FGTSYTDTGN DGNEYKIDIP AIECLPKLIE
410 420 430 440 450
ARSRFANGPQ TDIFDDASCI AFIRHGTADA PGCVVVMSNG EPGEKQADLG
460 470 480 490
PERAGSVWRD FLGHREEHIT LDESGKGTFP TNGGSVSVWV PADSE
Length:495
Mass (Da):55,796
Last modified:January 14, 2008 - v2
Checksum:i1BE9EEBDD82BA979
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89505.2.
RefSeqiNP_356720.2. NC_003063.2.

Genome annotation databases

EnsemblBacteriaiAAK89505; AAK89505; Atu3914.
GeneIDi1135788.
KEGGiatu:Atu3914.
PATRICi20817262. VBIAgrTum91616_3738.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89505.2.
RefSeqiNP_356720.2. NC_003063.2.

3D structure databases

ProteinModelPortaliQ7CTL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176299.Atu3914.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK89505; AAK89505; Atu3914.
GeneIDi1135788.
KEGGiatu:Atu3914.
PATRICi20817262. VBIAgrTum91616_3738.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciAGRO:ATU3914-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970Imported.

Entry informationi

Entry nameiQ7CTL9_AGRT5
AccessioniPrimary (citable) accession number: Q7CTL9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 4, 2004
Last sequence update: January 14, 2008
Last modified: February 3, 2015
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.