Q7CSS8 (Q7CSS8_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,3-1,4-beta-glycanase EMBL AAK89834.2

Gene names

Name:	exsH EMBL AAK89834.2
Ordered Locus Names:	Atu3564 EMBL AAK89834.2

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7CSS8 [UniParc]. Last modified January 15, 2008. Version 2. Checksum: CD0F1EBAC1B15408	FASTA	465	49,951
	10 20 30 40 50 60 MARTVVNALG DTLYYSGSST GFFSATGSGP LLGGTTGNDS MWGDSSVNVT MAGGTGDDIY 70 80 90 100 110 120 YLYSSINRAV ENAGEGIDTI DTWMSYTLPE NFENLRVTGD GRYAFGNSLD NIITGGSGSQ 130 140 150 160 170 180 TIDGGAGNDV LIGGGGADTF VFTSGNGTDL IMDFSANDTI RLNGYGVTSF DQLVNNATQQ 190 200 210 220 230 240 GNDLWLNFSN GEAVVLAGTT VDDLQADQFE LSLDRSSFTQ TFADEFDALS LRSGGQGIWD 250 260 270 280 290 300 AKYWWAPEKG SSLTANGEAQ WYINPAYAGT TEVNPFSVQN GVLTITAAET AQSIADEVEG 310 320 330 340 350 360 YDYTSGMLNT YSSFSQTYGY FEIRADMPTD RGAWPAFWLL PEDGSWPPEL DVIEMRGQNP 370 380 390 400 410 420 NTLIMSTHSN ATGEQTSVIN NVSVPNTEGF HTYGVLWDAE HITWYFDDVA VAQTETPDDM 430 440 450 460 HDPMYMVVNL AVGGMAGTPS ASDFSDGSQM MIDYIRAYSL SDWAA

References

[1]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007870 Genomic DNA. Translation: AAK89834.2.
RefSeq	NP_357049.2. NC_003063.2.
3D structure databases
ProteinModelPortal	Q7CSS8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7CSS8.
Protein family/group databases
CAZy	GH16. Glycoside Hydrolase Family 16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1135438.
GenomeReviews	Gene locus Atu3564 in contig AE007870_GR.
KEGG	atu:Atu3564.
PATRIC	20816590. VBIAgrTum91616_3406.
Phylogenomic databases
eggNOG	COG2931.
HOGENOM	HBG400933.
OMA	VVEMRGQ.
PhylomeDB	Q7CSS8.
ProtClustDB	CLSK863529.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000757. Glyco_hydro_16. IPR011049. Serralysin-like_metalloprot_C. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF00722. Glyco_hydro_16. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF51120. Serralysn_like_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7CSS8_AGRT5

Accession

Primary (citable) accession number: Q7CSS8

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 45 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)