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Protein
Submitted name:

Putative secreted protein

Gene

STM0082

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSENT99287:GCTI-82-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative secreted proteinImported
Gene namesi
Ordered Locus Names:STM0082Imported
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Imported
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 9675Sequence analysisPRO_5004288141Add
BLAST

Proteomic databases

PaxDbiQ7CR88.
PRIDEiQ7CR88.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM0082.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JNANMR-A/B1-96[»]
2MA8NMR-A/B22-96[»]
ProteinModelPortaliQ7CR88.
SMRiQ7CR88. Positions 1-96.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7CR88.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini35 – 9258DUF1471InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG41065Q3. Bacteria.
ENOG41122BS. LUCA.
HOGENOMiHOG000117400.
OMAiHGKFSAT.
OrthoDBiEOG68H8CC.
PhylomeDBiQ7CR88.

Family and domain databases

Gene3Di3.30.1660.10. 1 hit.
InterProiIPR025543. Dodecin-like.
IPR010854. DUF1471.
[Graphical view]
PfamiPF07338. DUF1471. 1 hit.
[Graphical view]
SUPFAMiSSF159871. SSF159871. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7CR88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKRIIAAAL LATVASFSTL AAEQVSKQEI SHFKLVKVGT INVSQSGGQI
60 70 80 90
SSPSDLREKL SELADAKGGK YYHIIAAREH GPNFEAVAEV YNDATK
Length:96
Mass (Da):10,303
Last modified:July 5, 2004 - v1
Checksum:iBA5BCDAE439EB2FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL19046.1.
RefSeqiNP_459087.1. NC_003197.1.
WP_000745961.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL19046; AAL19046; STM0082.
GeneIDi1251600.
KEGGistm:STM0082.
PATRICi32378431. VBISalEnt20916_0085.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL19046.1.
RefSeqiNP_459087.1. NC_003197.1.
WP_000745961.1. NC_003197.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JNANMR-A/B1-96[»]
2MA8NMR-A/B22-96[»]
ProteinModelPortaliQ7CR88.
SMRiQ7CR88. Positions 1-96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM0082.

Proteomic databases

PaxDbiQ7CR88.
PRIDEiQ7CR88.

Protocols and materials databases

DNASUi1251600.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL19046; AAL19046; STM0082.
GeneIDi1251600.
KEGGistm:STM0082.
PATRICi32378431. VBISalEnt20916_0085.

Phylogenomic databases

eggNOGiENOG41065Q3. Bacteria.
ENOG41122BS. LUCA.
HOGENOMiHOG000117400.
OMAiHGKFSAT.
OrthoDBiEOG68H8CC.
PhylomeDBiQ7CR88.

Enzyme and pathway databases

BioCyciSENT99287:GCTI-82-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ7CR88.

Family and domain databases

Gene3Di3.30.1660.10. 1 hit.
InterProiIPR025543. Dodecin-like.
IPR010854. DUF1471.
[Graphical view]
PfamiPF07338. DUF1471. 1 hit.
[Graphical view]
SUPFAMiSSF159871. SSF159871. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720Imported.
  2. "Solution NMR Structure of Salmonella typhimurium LT2 Secreted Protein STM0082: Northeast Structural Genomics Consortium Target StR109."
    Northeast Structural Genomics Consortium (NESG)
    Eletsky A., Parish D., Liu G., Sukumaran D., Jiang M., Cunningham K., Ma L., Xiao R., Rost B., Montelione G.T., Szyperski T.
    Submitted (DEC-2006) to the PDB data bank
    Cited for: STRUCTURE BY NMR.
  3. Cited for: STRUCTURE BY NMR OF 22-96.

Entry informationi

Entry nameiQ7CR88_SALTY
AccessioniPrimary (citable) accession number: Q7CR88
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 17, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.