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Q7CL43

- Q7CL43_YERPE

UniProt

Q7CL43 - Q7CL43_YERPE

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Protein
Submitted name:

Deoxyribose-phosphate aldolase

Gene

deoC3

Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.SAAS annotation

Catalytic activityi

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.SAAS annotation

Pathwayi

GO - Molecular functioni

  1. deoxyribose-phosphate aldolase activity Source: UniProtKB-EC

GO - Biological processi

  1. deoxyribonucleotide catabolic process Source: InterPro
  2. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

LyaseSAAS annotationImported

Keywords - Ligandi

Schiff baseSAAS annotation

Enzyme and pathway databases

BioCyciYPES214092:GKDD-3579-MONOMER.
UniPathwayiUPA00002; UER00468.

Names & Taxonomyi

Protein namesi
Submitted name:
Deoxyribose-phosphate aldolaseImported (EC:4.1.2.4Imported)
Submitted name:
Putative deoxyribose-phosphate aldolaseImported (EC:4.1.2.4Imported)
Gene namesi
Name:deoC3Imported
Synonyms:deoCImported
Ordered Locus Names:y0247Imported, YP_3925Imported, YPO3622Imported
ORF Names:DJ56_2773Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000815: Chromosome, UP000001019: Chromosome, UP000002490: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi214092.YPO3622.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000241645.
KOiK01619.
OMAiEACMELG.
OrthoDBiEOG6QZMW5.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
[Graphical view]
PANTHERiPTHR10889. PTHR10889. 1 hit.
PfamiPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFiPIRSF001357. DeoC. 1 hit.
TIGRFAMsiTIGR00126. deoC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7CL43-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIDFNDPRQV AKAIQFTNVN ADLTREGVIK HLNICLEYQF DAAMIAPCWV
60 70 80 90 100
YLAKDVLKGS GVRVATTVNF PQANDTTAMK VAIVRELAKE GADEFDFPPN
110 120 130 140 150
PGFLLGGLDE LYFNELKEVT HIAHDLGMKV KAMLEFGFIT EEAMKIKATR
160 170 180 190 200
YAYEAGIDWV KQSSGWGKGG CAATVEDVQL LKANIQAPCR VKVSGKVNTL
210 220 230
EKMKEMFLAG AELVGTSSGP ELVKGLTGDI NAY
Length:233
Mass (Da):25,470
Last modified:July 5, 2004 - v1
Checksum:i9E3D42F7539138B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM83841.1.
AE017042 Genomic DNA. Translation: AAS64069.1.
AL590842 Genomic DNA. Translation: CAL22210.1.
JPMB01000012 Genomic DNA. Translation: KGA54757.1.
PIRiAG0440.
RefSeqiNP_667590.1. NC_004088.1.
NP_995192.1. NC_005810.1.
YP_002348507.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM83841; AAM83841; y0247.
AAS64069; AAS64069; YP_3925.
GeneIDi1145194.
1176442.
2767295.
KEGGiype:YPO3622.
ypk:y0247.
ypm:YP_3925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM83841.1 .
AE017042 Genomic DNA. Translation: AAS64069.1 .
AL590842 Genomic DNA. Translation: CAL22210.1 .
JPMB01000012 Genomic DNA. Translation: KGA54757.1 .
PIRi AG0440.
RefSeqi NP_667590.1. NC_004088.1.
NP_995192.1. NC_005810.1.
YP_002348507.1. NC_003143.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 214092.YPO3622.

Protocols and materials databases

DNASUi 1145194.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM83841 ; AAM83841 ; y0247 .
AAS64069 ; AAS64069 ; YP_3925 .
GeneIDi 1145194.
1176442.
2767295.
KEGGi ype:YPO3622.
ypk:y0247.
ypm:YP_3925.

Phylogenomic databases

HOGENOMi HOG000241645.
KOi K01619.
OMAi EACMELG.
OrthoDBi EOG6QZMW5.

Enzyme and pathway databases

UniPathwayi UPA00002 ; UER00468 .
BioCyci YPES214092:GKDD-3579-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
[Graphical view ]
PANTHERi PTHR10889. PTHR10889. 1 hit.
Pfami PF01791. DeoC. 1 hit.
[Graphical view ]
PIRSFi PIRSF001357. DeoC. 1 hit.
TIGRFAMsi TIGR00126. deoC. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92 / Biovar OrientalisImported and CO92Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIMImported and KIM10+ / Biovar MediaevalisImported.
  3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
    Delihas N.
    BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CO92Imported.
  4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
  5. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
    Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
    J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 91001Imported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Colorado 92Imported.

Entry informationi

Entry nameiQ7CL43_YERPE
AccessioniPrimary (citable) accession number: Q7CL43
Secondary accession number(s): Q74PI2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 26, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3