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Q7CL43

- Q7CL43_YERPE

UniProt

Q7CL43 - Q7CL43_YERPE

Protein
Submitted name:

Putative deoxyribose-phosphate aldolase

Gene

deoC3

Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.SAAS annotation

    Catalytic activityi

    2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.SAAS annotation

    Pathwayi

    GO - Molecular functioni

    1. deoxyribose-phosphate aldolase activity Source: UniProtKB-EC

    GO - Biological processi

    1. deoxyribonucleotide catabolic process Source: InterPro
    2. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    LyaseSAAS annotationImported

    Keywords - Ligandi

    Schiff baseSAAS annotation

    Enzyme and pathway databases

    BioCyciYPES214092:GKDD-3579-MONOMER.
    UniPathwayiUPA00002; UER00468.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative deoxyribose-phosphate aldolaseImported (EC:4.1.2.4Imported)
    Gene namesi
    Name:deoC3Imported
    Ordered Locus Names:y0247Imported, YP_3925Imported, YPO3622Imported
    OrganismiYersinia pestisImported
    Taxonomic identifieri632 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000001019: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi214092.YPO3622.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000241645.
    KOiK01619.
    OMAiEACMELG.
    OrthoDBiEOG6QZMW5.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    InterProiIPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    [Graphical view]
    PANTHERiPTHR10889. PTHR10889. 1 hit.
    PfamiPF01791. DeoC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001357. DeoC. 1 hit.
    TIGRFAMsiTIGR00126. deoC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7CL43-1 [UniParc]FASTAAdd to Basket

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    MIDFNDPRQV AKAIQFTNVN ADLTREGVIK HLNICLEYQF DAAMIAPCWV    50
    YLAKDVLKGS GVRVATTVNF PQANDTTAMK VAIVRELAKE GADEFDFPPN 100
    PGFLLGGLDE LYFNELKEVT HIAHDLGMKV KAMLEFGFIT EEAMKIKATR 150
    YAYEAGIDWV KQSSGWGKGG CAATVEDVQL LKANIQAPCR VKVSGKVNTL 200
    EKMKEMFLAG AELVGTSSGP ELVKGLTGDI NAY 233
    Length:233
    Mass (Da):25,470
    Last modified:July 5, 2004 - v1
    Checksum:i9E3D42F7539138B7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM83841.1.
    AE017042 Genomic DNA. Translation: AAS64069.1.
    AL590842 Genomic DNA. Translation: CAL22210.1.
    PIRiAG0440.
    RefSeqiNP_667590.1. NC_004088.1.
    NP_995192.1. NC_005810.1.
    YP_002348507.1. NC_003143.1.

    Genome annotation databases

    EnsemblBacteriaiAAM83841; AAM83841; y0247.
    AAS64069; AAS64069; YP_3925.
    GeneIDi1145194.
    1176442.
    2767295.
    KEGGiype:YPO3622.
    ypk:y0247.
    ypm:YP_3925.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM83841.1 .
    AE017042 Genomic DNA. Translation: AAS64069.1 .
    AL590842 Genomic DNA. Translation: CAL22210.1 .
    PIRi AG0440.
    RefSeqi NP_667590.1. NC_004088.1.
    NP_995192.1. NC_005810.1.
    YP_002348507.1. NC_003143.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 214092.YPO3622.

    Protocols and materials databases

    DNASUi 1145194.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM83841 ; AAM83841 ; y0247 .
    AAS64069 ; AAS64069 ; YP_3925 .
    GeneIDi 1145194.
    1176442.
    2767295.
    KEGGi ype:YPO3622.
    ypk:y0247.
    ypm:YP_3925.

    Phylogenomic databases

    HOGENOMi HOG000241645.
    KOi K01619.
    OMAi EACMELG.
    OrthoDBi EOG6QZMW5.

    Enzyme and pathway databases

    UniPathwayi UPA00002 ; UER00468 .
    BioCyci YPES214092:GKDD-3579-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    InterProi IPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    [Graphical view ]
    PANTHERi PTHR10889. PTHR10889. 1 hit.
    Pfami PF01791. DeoC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001357. DeoC. 1 hit.
    TIGRFAMsi TIGR00126. deoC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CO92Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KIMImported.
    3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
      Delihas N.
      BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CO92Imported.
    4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
      Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
      , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
      DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
    5. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
      Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
      J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 91001Imported.

    Entry informationi

    Entry nameiQ7CL43_YERPE
    AccessioniPrimary (citable) accession number: Q7CL43
    Secondary accession number(s): Q74PI2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3