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Q7CL15 (Q7CL15_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Secreted hemophore EMBL AAM83905.1
Gene names
Name:hasA EMBL AAM83905.1
Ordered Locus Names:y0314 EMBL AAM83905.1, YP_3127 EMBL AAS63297.1, YPO3922 EMBL CAL22506.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length205 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding751Iron (heme axial ligand) PDB 4JET
Metal binding1691Sodium; via carbonyl oxygen
Metal binding1721Sodium; via carbonyl oxygen
Metal binding1751Sodium; via carbonyl oxygen
Binding site401Chloride PDB 4JET
Binding site551Hexaethylene glycol PDB 4JES
Binding site831Hexaethylene glycol PDB 4JES
Binding site1441Hexaethylene glycol PDB 4JES

Sequences

Sequence LengthMass (Da)Tools
Q7CL15 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 8B4A2C178B6B2EA9

FASTA20522,231
        10         20         30         40         50         60 
MSTTIQYNSN YADYSISSYL REWANNFGDI DQAPAETKDR GSFSGSSTLF SGTQYAIGSS 

        70         80         90        100        110        120 
HSNPEGMIAE GDLKYSFMPQ HTFHGQIDTL QFGKDLATNA GGPSAGKHLE KIDITFNELD 

       130        140        150        160        170        180 
LSGEFDSGKS MTENHQGDMH KSVRGLMKGN PDPMLEVMKA KGINVDTAFK DLSIASQYPD 

       190        200 
SGYMSDAPMV DTVGVVDCHD MLLAA 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL22506.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM83905.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL22506.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS63297.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS63297.1.
[6]"The hemophore HasA from Yersinia pestis (HasAyp) coordinates hemin with a single residue, Tyr75, and with minimal conformational change."
Kumar R., Lovell S., Matsumura H., Battaile K.P., Moenne-Loccoz P., Rivera M.
Biochemistry 52:2705-2707(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.10 ANGSTROMS) OF 1-193 IN COMPLEX WITH CHLORIDE; HEME; HEXAETHYLENE GLYCOL AND SODIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM83905.1.
AE017042 Genomic DNA. Translation: AAS63297.1.
AL590842 Genomic DNA. Translation: CAL22506.1.
PIRAG0477.
RefSeqNP_667654.1. NC_004088.1.
NP_994420.1. NC_005810.1.
YP_002348796.1. NC_003143.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4JERX-ray1.10A1-193[»]
4JESX-ray1.60A/B1-193[»]
4JETX-ray2.20A/B/C/D/E/F/G/H/I/J1-193[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING214092.YPO3922.

Protocols and materials databases

DNASU1145261.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM83905; AAM83905; y0314.
AAS63297; AAS63297; YP_3127.
GeneID1145261.
1176764.
2766056.
KEGGype:YPO3922.
ypk:y0314.
ypm:YP_3127.

Phylogenomic databases

HOGENOMHOG000219133.
KOK12545.
OMAYLTEWSA.
OrthoDBEOG6CVVBX.
ProtClustDBCLSK889596.

Enzyme and pathway databases

BioCycYPES214092:GKDD-3900-MONOMER.

Family and domain databases

Gene3D3.30.1500.10. 1 hit.
InterProIPR010495. HasA_haem-bd.
[Graphical view]
PfamPF06438. HasA. 1 hit.
[Graphical view]
PIRSFPIRSF019876. HasA. 1 hit.
SUPFAMSSF54621. SSF54621. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7CL15_YERPE
AccessionPrimary (citable) accession number: Q7CL15
Secondary accession number(s): Q74RD4
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)