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Protein
Submitted name:

Putative thioredoxin-like protein

Gene

trxC

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi5 – 51ZincCombined sources
Metal bindingi8 – 81ZincCombined sources
Metal bindingi25 – 251ZincCombined sources
Metal bindingi28 – 281ZincCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciYPES214092:GKDD-3221-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative thioredoxin-like proteinImported
Submitted name:
Thioredoxin 2Imported
Gene namesi
Name:trxCImported
Ordered Locus Names:y0919Imported, YP_0661Imported, YPO3270Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Chromosome
  • UP000001019 Componenti: Chromosome
  • UP000002490 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi64 ↔ 67Combined sources

Interactioni

Protein-protein interaction databases

STRINGi187410.y0919.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3P2AX-ray2.19A/B/C/D1-145[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 140115ThioredoxinInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 thioredoxin domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K63. Bacteria.
COG0526. LUCA.
HOGENOMiHOG000292979.
KOiK03672.
OMAiQRVDMIN.
OrthoDBiEOG6QG8RK.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR005746. Thioredoxin.
IPR012336. Thioredoxin-like_fold.
IPR017937. Thioredoxin_CS.
IPR013766. Thioredoxin_domain.
[Graphical view]
PANTHERiPTHR10438. PTHR10438. 1 hit.
PfamiPF00085. Thioredoxin. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
TIGRFAMsiTIGR01068. thioredoxin. 1 hit.
PROSITEiPS00194. THIOREDOXIN_1. 1 hit.
PS51352. THIOREDOXIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7CK81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTVCTACMA TNRLPEERID DGAKCGRCGH SLFDGEVINA TAETLDKLLQ
60 70 80 90 100
DDLPMVIDFW APWCGPCRSF APIFAETAAE RAGKVRFVKV NTEAEPALST
110 120 130 140
RFRIRSIPTI MLYRNGKMID MLNGAVPKAP FDNWLDEQLS RDPNS
Length:145
Mass (Da):16,168
Last modified:July 5, 2004 - v1
Checksum:i70C082F613AB87F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM84501.1.
AE017042 Genomic DNA. Translation: AAS60928.1.
AL590842 Genomic DNA. Translation: CAL21863.1.
PIRiAD0397.
RefSeqiWP_002216643.1. NZ_LIXY01000015.1.
YP_002348170.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM84501; AAM84501; y0919.
AAS60928; AAS60928; YP_0661.
KNX87014; KNX87014; ACX54_2851.
KNX90154; KNX90154; ACX52_2621.
GeneIDi1176083.
KEGGiype:YPO3270.
ypj:CH55_1839.
ypk:y0919.
ypl:CH46_1837.
ypm:YP_0661.
ypv:BZ15_265.
ypw:CH59_2793.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM84501.1.
AE017042 Genomic DNA. Translation: AAS60928.1.
AL590842 Genomic DNA. Translation: CAL21863.1.
PIRiAD0397.
RefSeqiWP_002216643.1. NZ_LIXY01000015.1.
YP_002348170.1. NC_003143.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3P2AX-ray2.19A/B/C/D1-145[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi187410.y0919.

Protocols and materials databases

DNASUi1145866.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM84501; AAM84501; y0919.
AAS60928; AAS60928; YP_0661.
KNX87014; KNX87014; ACX54_2851.
KNX90154; KNX90154; ACX52_2621.
GeneIDi1176083.
KEGGiype:YPO3270.
ypj:CH55_1839.
ypk:y0919.
ypl:CH46_1837.
ypm:YP_0661.
ypv:BZ15_265.
ypw:CH59_2793.

Phylogenomic databases

eggNOGiENOG4105K63. Bacteria.
COG0526. LUCA.
HOGENOMiHOG000292979.
KOiK03672.
OMAiQRVDMIN.
OrthoDBiEOG6QG8RK.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-3221-MONOMER.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR005746. Thioredoxin.
IPR012336. Thioredoxin-like_fold.
IPR017937. Thioredoxin_CS.
IPR013766. Thioredoxin_domain.
[Graphical view]
PANTHERiPTHR10438. PTHR10438. 1 hit.
PfamiPF00085. Thioredoxin. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
TIGRFAMsiTIGR01068. thioredoxin. 1 hit.
PROSITEiPS00194. THIOREDOXIN_1. 1 hit.
PS51352. THIOREDOXIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92 / Biovar OrientalisImported and CO92Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIMImported and KIM10+ / Biovar MediaevalisImported.
  3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
    Delihas N.
    BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CO92Imported.
  4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported and 91001 / Biovar MediaevalisImported.

Entry informationi

Entry nameiQ7CK81_YERPE
AccessioniPrimary (citable) accession number: Q7CK81
Secondary accession number(s): Q74X06
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 11, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.