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Q7CHS5 (Q7CHS5_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative symporter EMBL AAM86167.1
Gene names
Name:yeeF EMBL CAL20202.1
Synonyms:potE2 EMBL AAS61685.1
Ordered Locus Names:y2612 EMBL AAM86167.1, YP_1445 EMBL AAS61685.1, YPO1557 EMBL CAL20202.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane RuleBase RU003697
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionamino acid transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q7CHS5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: D0BD3747147F9226

FASTA46350,183
        10         20         30         40         50         60 
MAHDATVAVG TNQTGTNNRV QLRKTLTLVQ VVMMGLAYLQ PMTIFDTFGI VSGLTDGHVA 

        70         80         90        100        110        120 
TSYAIALIAV LFTAVSYGKL VKRFPSAGSA YTYAQKSISP NVGFMVGWSS LLDYLFMPMI 

       130        140        150        160        170        180 
NILLAKIYLE AIFPGVPSWI FVGALVSLMT LFNLRGINIV ANLNSVIVVV QVAIMVVFMG 

       190        200        210        220        230        240 
LLIHGVYQGE GAGTLVSARP FYSENAHLVP MITGATILCF SFLGFDGISS LSEETPNAGK 

       250        260        270        280        290        300 
VIPKAIFLTA LIGGIIFIAV SYCLQLYFPD ISRFTDPEAS QPEIMLFVAG KFFQSVILCF 

       310        320        330        340        350        360 
SCVTVLASGM AAHAGVSRLL YVMGRDGVFP EKVFGYVHPK WRTPAINVLL VGGVALSAIS 

       370        380        390        400        410        420 
FDLVTATALI NFGALVAFTF VNLSVIAQFY VRERRNSTFK DHFNYLILPM IGAGTVGVLW 

       430        440        450        460 
VNLESSSMTL GLVWGAIGLS YMVWKTRAFR RALPQFTEEP AQL 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL20202.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM86167.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL20202.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS61685.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS61685.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM86167.1.
AE017042 Genomic DNA. Translation: AAS61685.1.
AL590842 Genomic DNA. Translation: CAL20202.1.
PIRAH0189.
RefSeqNP_669916.1. NC_004088.1.
NP_992808.1. NC_005810.1.
YP_002346571.1. NC_003143.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ7CHS5. 1 interaction.
STRING214092.YPO1557.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM86167; AAM86167; y2612.
AAS61685; AAS61685; YP_1445.
GeneID1147559.
1174395.
2765190.
KEGGype:YPO1557.
ypk:y2612.
ypm:YP_1445.

Phylogenomic databases

HOGENOMHOG000164060.
OMAGNLFQSI.
ProtClustDBCLSK2461889.

Family and domain databases

InterProIPR002293. AA/rel_permease1.
[Graphical view]
PANTHERPTHR11785. PTHR11785. 1 hit.
PIRSFPIRSF006060. AA_transporter. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7CHS5_YERPE
AccessionPrimary (citable) accession number: Q7CHS5
Secondary accession number(s): Q74V84
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)