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Q7CHP0 (Q7CHP0_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:y2684 EMBL AAM86237.1, YP_1375 EMBL AAS61616.1, YPO1485 EMBL CAL20131.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length587 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q7CHP0 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 389A200B93753764

FASTA58767,419
        10         20         30         40         50         60 
MDDLTLRYFD AEMRYLREAG EEFARAHPDR AAGLNLDKAG ARDPYVERLF EGFAFLMGRL 

        70         80         90        100        110        120 
REKLDDDLPE LTEGLVSLLW PHYLRTIPSL SIVEFTPQWQ GMKERMGVSK GFEVLSRPIG 

       130        140        150        160        170        180 
ERETRCRYTT TQEMDLLPLT LRRAGLDSEP DGRSVIRLRF DCSALADWSR INLSRLPLYF 

       190        200        210        220        230        240 
DADAPLACAL HEALTLNTAK LWIRLPGQAD RQPLDGHFAP LGFGEQDTLW PKADSAFSGY 

       250        260        270        280        290        300 
QLLLEYFTFR EKFMFVALQG LDGIELPAEL PWFEIDVVLE KRWQHDFSFS EKNLRLHCVP 

       310        320        330        340        350        360 
VINLFPLESD PLSLSSLQTE YLLRPMRIQD GYTEVYSVDS VISSRHTGHQ VYVPFTSFRH 

       370        380        390        400        410        420 
KGGMLRHDAP EYYYHTRVKR GPSGLHDTWL VLGGEAFDNH SVPDNENLSL SLTGTNGQLP 

       430        440        450        460        470        480 
RKALQSTVLD TAVKSTGAQV RVRNLSAPSL PCYPPNRDRF HWRVLSHLGS SFLWMMDNAE 

       490        500        510        520        530        540 
VLRGTLALYD WTDNEMNRRR LEAIAEVKHS EIERFERGYL LRGVHIEITL DSNGFTGTGD 

       550        560        570        580 
ICLFGEMLSR FFALYTDIHL FNRLTLILQP TGERLEWEEN HQSRLPG 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL20131.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM86237.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL20131.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS61616.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS61616.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM86237.1.
AE017042 Genomic DNA. Translation: AAS61616.1.
AL590842 Genomic DNA. Translation: CAL20131.1.
PIRAI0180.
RefSeqNP_669986.1. NC_004088.1.
NP_992739.1. NC_005810.1.
YP_002346501.1. NC_003143.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING214092.YPO1485.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM86237; AAM86237; y2684.
AAS61616; AAS61616; YP_1375.
GeneID1147631.
1174324.
2766914.
KEGGype:YPO1485.
ypk:y2684.
ypm:YP_1375.

Phylogenomic databases

HOGENOMHOG000255466.
KOK11896.
OMAEARLHTE.
OrthoDBEOG6JX7DT.
ProtClustDBCLSK888855.

Enzyme and pathway databases

BioCycYPES214092:GKDD-1466-MONOMER.

Family and domain databases

InterProIPR010272. T6SS_VCA0110.
[Graphical view]
PfamPF05947. DUF879. 1 hit.
[Graphical view]
PIRSFPIRSF028304. UCP028304. 1 hit.
TIGRFAMsTIGR03359. VI_chp_6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7CHP0_YERPE
AccessionPrimary (citable) accession number: Q7CHP0
Secondary accession number(s): Q74VD6
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)