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Q7CHB4 (Q7CHB4_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL AAM86493.1
Gene names
Ordered Locus Names:y2942 EMBL AAM86493.1, YP_0896 EMBL AAS61152.1, YPO1245 EMBL CAL19902.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentCapsid protein EMBL AAS61152.1
Virion
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentviral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q7CHB4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 8F2FE152DB2E59C5

FASTA49754,782
        10         20         30         40         50         60 
MTEIFDFDLA IDAQVTESVS QMNKAIKALV PQFNELRKSV EAINHVIPLF IMRIEGFHNE 

        70         80         90        100        110        120 
YGNISGGTRT SSDNSLMTSI ANIANSYITG GKFNLIYTIG SEFASAVSQA ASEARTVNKV 

       130        140        150        160        170        180 
TQNAGAPIDQ FSQLYGAMQI RGTDQEAAIK STERLYNTFN NILWRRDEQG WNLLQDYGLD 

       190        200        210        220        230        240 
IASNKNGTVD APTTLTNMAK EFPQMAPQDQ HQLIHILRMD SNAIELLREG GQLTDLLAKS 

       250        260        270        280        290        300 
RQYGLTIDPQ LNARLTELNI RTNELSMAWD GLKGKASNKL YDVLFSDGTI ADGIGGLTDM 

       310        320        330        340        350        360 
ITYGPDNFSI MRTLGVTQGI DTDKMRRGYN DADFYQQLNF YEKAMLSAGL MTDGFRKKYQ 

       370        380        390        400        410        420 
GNNEEKNATS AVNAVAINTV AINSDIPEFN LGKDLFNFGA ETENTWKNNW LTDIHAEEPS 

       430        440        450        460        470        480 
SDFGYNDIDI NPVNLSLISP ESAGDFNGNA IADVIATAMQ NNRVQIELTL IDSRTGETSL 

       490 
IQAQGGARIA HAMELGH 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL19902.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM86493.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL19902.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS61152.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS61152.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM86493.1.
AE017042 Genomic DNA. Translation: AAS61152.1.
AL590842 Genomic DNA. Translation: CAL19902.1.
PIRAD0152.
RefSeqNP_670242.1. NC_004088.1.
NP_992275.1. NC_005810.1.
YP_002346274.1. NC_003143.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING214092.YPO1245.

Protocols and materials databases

DNASU1147889.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM86493; AAM86493; y2942.
AAS61152; AAS61152; YP_0896.
GeneID1147889.
1174090.
2765804.
KEGGype:YPO1245.
ypk:y2942.
ypm:YP_0896.

Phylogenomic databases

HOGENOMHOG000266733.
OMAEFNPGKD.
OrthoDBEOG67T5FB.
ProtClustDBCLSK888775.

Enzyme and pathway databases

BioCycYPES214092:GKDD-1237-MONOMER.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameQ7CHB4_YERPE
AccessionPrimary (citable) accession number: Q7CHB4
Secondary accession number(s): Q74WH5
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)