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Protein

Flagellar basal body rod protein FlgB

Gene

lfgB

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.UniRule annotation

GO - Biological processi

  1. bacterial-type flagellum-dependent cell motility Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciYPES214092:GKDD-712-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar basal body rod protein FlgBUniRule annotation
Gene namesi
Name:lfgBImported
Synonyms:flgBImported, flgB2Imported
Ordered Locus Names:y3456Imported, YP_3034Imported, YPO0722Imported
ORF Names:DJ56_1676Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000815: Chromosome, UP000001019: Chromosome, UP000002490: Chromosome

Subcellular locationi

Bacterial flagellum basal body UniRule annotation

GO - Cellular componenti

  1. bacterial-type flagellum basal body Source: UniProtKB-SubCell
  2. motile cilium Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation, Cell projection, Cilium, FlagellumImported

Interactioni

Subunit structurei

The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.UniRule annotation

Protein-protein interaction databases

STRINGi214092.YPO0722.

Structurei

3D structure databases

ProteinModelPortaliQ7CGK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the flagella basal body rod proteins family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000257191.
KOiK02387.
OMAiDFQTSLT.
OrthoDBiEOG6Q8J3B.

Family and domain databases

InterProiIPR001444. Flag_bb_rod_N.
IPR019776. Flagellar_basal_body_rod_CS.
IPR006300. FlgB.
[Graphical view]
PfamiPF00460. Flg_bb_rod. 1 hit.
[Graphical view]
PIRSFiPIRSF002889. Rod_FlgB. 1 hit.
TIGRFAMsiTIGR01396. FlgB. 1 hit.
PROSITEiPS00588. FLAGELLA_BB_ROD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7CGK5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGIHFQKALG VHPMAMQLRL TRAELLSANL ANVNTPNFQA KDIDFAAEMQ
60 70 80 90 100
RAKRGNGVMA APDRSSAQML STQMSSAQMS SPQMMSSPQI MSSPQIKYRL
110 120 130 140
PYQPSLDGNT VALNVEQAEF SKNALDYQTS LSFLNMKLTG LKQAIEGK
Length:148
Mass (Da):16,240
Last modified:July 5, 2004 - v1
Checksum:i6D4E3703E3DD0113
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM87005.1.
AE017042 Genomic DNA. Translation: AAS63209.1.
AL590842 Genomic DNA. Translation: CAL19396.1.
JPMB01000020 Genomic DNA. Translation: KGA53706.1.
PIRiAB0089.
RefSeqiNP_670754.1. NC_004088.1.
NP_994332.1. NC_005810.1.
YP_002345784.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM87005; AAM87005; y3456.
AAS63209; AAS63209; YP_3034.
GeneIDi1148403.
1173563.
2764865.
KEGGiype:YPO0722.
ypk:y3456.
ypm:YP_3034.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM87005.1.
AE017042 Genomic DNA. Translation: AAS63209.1.
AL590842 Genomic DNA. Translation: CAL19396.1.
JPMB01000020 Genomic DNA. Translation: KGA53706.1.
PIRiAB0089.
RefSeqiNP_670754.1. NC_004088.1.
NP_994332.1. NC_005810.1.
YP_002345784.1. NC_003143.1.

3D structure databases

ProteinModelPortaliQ7CGK5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi214092.YPO0722.

Protocols and materials databases

DNASUi1148403.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM87005; AAM87005; y3456.
AAS63209; AAS63209; YP_3034.
GeneIDi1148403.
1173563.
2764865.
KEGGiype:YPO0722.
ypk:y3456.
ypm:YP_3034.

Phylogenomic databases

HOGENOMiHOG000257191.
KOiK02387.
OMAiDFQTSLT.
OrthoDBiEOG6Q8J3B.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-712-MONOMER.

Family and domain databases

InterProiIPR001444. Flag_bb_rod_N.
IPR019776. Flagellar_basal_body_rod_CS.
IPR006300. FlgB.
[Graphical view]
PfamiPF00460. Flg_bb_rod. 1 hit.
[Graphical view]
PIRSFiPIRSF002889. Rod_FlgB. 1 hit.
TIGRFAMsiTIGR01396. FlgB. 1 hit.
PROSITEiPS00588. FLAGELLA_BB_ROD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92 / Biovar OrientalisImported and CO92Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIMImported and KIM10+ / Biovar MediaevalisImported.
  3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
    Delihas N.
    BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CO92Imported.
  4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
  5. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
    Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
    J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 91001Imported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Colorado 92Imported.

Entry informationi

Entry nameiQ7CGK5_YERPE
AccessioniPrimary (citable) accession number: Q7CGK5
Secondary accession number(s): Q74RJ7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 4, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.