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Q7CG57

- Q7CG57_YERPE

UniProt

Q7CG57 - Q7CG57_YERPE

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Protein

DNA polymerase III subunit psi

Gene

holD

Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.UniRule annotation

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotation, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotation

Enzyme and pathway databases

BioCyciYPES214092:GKDD-425-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymerase III subunit psiUniRule annotation
Gene namesi
Name:holDImported
Synonyms:b4372Imported
Ordered Locus Names:y3752Imported, YP_3753Imported, YPO0428Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000001019: Chromosome

Interactioni

Protein-protein interaction databases

IntActiQ7CG57. 1 interaction.
STRINGi214092.YPO0428.

Structurei

3D structure databases

ProteinModelPortaliQ7CG57.
SMRiQ7CG57. Positions 27-135.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000218328.
KOiK02344.
OMAiITQWTLR.
OrthoDBiEOG6WDSJJ.

Family and domain databases

Gene3Di3.40.50.10220. 1 hit.
InterProiIPR004615. DNA_pol_III_psi.
[Graphical view]
PfamiPF03603. DNA_III_psi. 1 hit.
[Graphical view]
PIRSFiPIRSF029225. DNA_pol_III_psi. 1 hit.
ProDomiPD032475. DNA_pol_III_psi. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF102220. SSF102220. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7CG57-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASRRDLLLQ QLGITQWVLR RPAVLQGEIA IHLPEDTRLL IVAQQLPEHG
60 70 80 90 100
DPLLCDVLRS LGLTPHQVYA LTPDQVAMLP EDTQCNSWRL GISEPLAVAG
110 120 130 140
AQLHSPELAG LYQDAGAKRA LWQQICHYEA DFYPDASRSG HSIPN
Length:145
Mass (Da):16,077
Last modified:July 5, 2004 - v1
Checksum:i69CE1E35B4268B2A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE009952 Genomic DNA. Translation: AAM87297.1.
AE017042 Genomic DNA. Translation: AAS63901.1.
AL590842 Genomic DNA. Translation: CAL19109.1.
PIRiAC0053.
RefSeqiNP_671046.1. NC_004088.1.
NP_995024.1. NC_005810.1.
YP_002345504.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM87297; AAM87297; y3752.
AAS63901; AAS63901; YP_3753.
GeneIDi1148699.
1173274.
2765487.
KEGGiype:YPO0428.
ypk:y3752.
ypm:YP_3753.
PATRICi18589937. VBIYerPes7843_0706.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE009952 Genomic DNA. Translation: AAM87297.1 .
AE017042 Genomic DNA. Translation: AAS63901.1 .
AL590842 Genomic DNA. Translation: CAL19109.1 .
PIRi AC0053.
RefSeqi NP_671046.1. NC_004088.1.
NP_995024.1. NC_005810.1.
YP_002345504.1. NC_003143.1.

3D structure databases

ProteinModelPortali Q7CG57.
SMRi Q7CG57. Positions 27-135.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q7CG57. 1 interaction.
STRINGi 214092.YPO0428.

Protocols and materials databases

DNASUi 1148699.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM87297 ; AAM87297 ; y3752 .
AAS63901 ; AAS63901 ; YP_3753 .
GeneIDi 1148699.
1173274.
2765487.
KEGGi ype:YPO0428.
ypk:y3752.
ypm:YP_3753.
PATRICi 18589937. VBIYerPes7843_0706.

Phylogenomic databases

HOGENOMi HOG000218328.
KOi K02344.
OMAi ITQWTLR.
OrthoDBi EOG6WDSJJ.

Enzyme and pathway databases

BioCyci YPES214092:GKDD-425-MONOMER.

Family and domain databases

Gene3Di 3.40.50.10220. 1 hit.
InterProi IPR004615. DNA_pol_III_psi.
[Graphical view ]
Pfami PF03603. DNA_III_psi. 1 hit.
[Graphical view ]
PIRSFi PIRSF029225. DNA_pol_III_psi. 1 hit.
ProDomi PD032475. DNA_pol_III_psi. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF102220. SSF102220. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO92Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIMImported.
  3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
    Delihas N.
    BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CO92Imported.
  4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
  5. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
    Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
    J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 91001Imported.

Entry informationi

Entry nameiQ7CG57_YERPE
AccessioniPrimary (citable) accession number: Q7CG57
Secondary accession number(s): Q74PY1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3