Q7CG57 (Q7CG57_YERPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III, psi subunit EMBL AAM87297.1
EC=2.7.7.7 EMBL CAL19109.1

Gene names

Name:	holD EMBL AAM87297.1
Synonyms:	b4372 EMBL CAL19109.1
Ordered Locus Names:	y3752 EMBL AAM87297.1, YP_3753 EMBL AAS63901.1, YPO0428 EMBL CAL19109.1

Organism

Yersinia pestis [Reference proteome] [HAMAP]

Taxonomic identifier

632 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	145 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Nucleotidyltransferase EMBL CAL19109.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: InterPro
Molecular_function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7CG57 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 69CE1E35B4268B2A	FASTA	145	16,077
	10 20 30 40 50 60 MASRRDLLLQ QLGITQWVLR RPAVLQGEIA IHLPEDTRLL IVAQQLPEHG DPLLCDVLRS 70 80 90 100 110 120 LGLTPHQVYA LTPDQVAMLP EDTQCNSWRL GISEPLAVAG AQLHSPELAG LYQDAGAKRA 130 140 LWQQICHYEA DFYPDASRSG HSIPN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of Yersinia pestis, the causative agent of plague." Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G. Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL19109.1.
[2]	"Genome sequence of Yersinia pestis KIM." Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. , Matson J.S., Blattner F.R., Perry R.D. J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KIM EMBL AAM87297.1 and KIM10+ / Biovar Mediaevalis.
[3]	"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species." Delihas N. BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CO92 EMBL CAL19109.1.
[4]	"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans." Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R. DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 91001 EMBL AAS63901.1 and 91001 / Biovar Mediaevalis.
[5]	"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus." Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R. J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 91001 EMBL AAS63901.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE009952 Genomic DNA. Translation: AAM87297.1. AE017042 Genomic DNA. Translation: AAS63901.1. AL590842 Genomic DNA. Translation: CAL19109.1.
PIR	AC0053.
RefSeq	NP_671046.1. NC_004088.1. NP_995024.1. NC_005810.1. YP_002345504.1. NC_003143.1.
3D structure databases
HSSP	HSSP built from PDB template 1EM8 based on UniProtKB P28632.
SMR	Q7CG57. Positions 27-135.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q7CG57. 1 interaction.
STRING	214092.YPO0428.
Protocols and materials databases
DNASU	1148699.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAM87297; AAM87297; y3752. AAS63901; AAS63901; YP_3753.
GeneID	1148699. 1173274. 2765487.
KEGG	ype:YPO0428. ypk:y3752. ypm:YP_3753.
PATRIC	18589937. VBIYerPes7843_0706.
Phylogenomic databases
HOGENOM	HOG000218328.
KO	K02344.
OMA	ITQWTLR.
ProtClustDB	PRK06856.
Family and domain databases
Gene3D	3.40.50.10220. 1 hit.
InterPro	IPR004615. DNA_pol_III_psi. [Graphical view]
Pfam	PF03603. DNA_III_psi. 1 hit. [Graphical view]
PIRSF	PIRSF029225. DNA_pol_III_psi. 1 hit.
ProDom	PD032475. DNA_pol_III_psi. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF102220. DNA_pol_III_psi. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7CG57_YERPE

Accession

Primary (citable) accession number: Q7CG57
Secondary accession number(s): Q74PY1

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)