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Q7CG57 (Q7CG57_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA polymerase III subunit psi PIRNR PIRNR029225
Gene names
Name:holD EMBL AAM87297.1
Synonyms:b4372 EMBL CAL19109.1
Ordered Locus Names:y3752 EMBL AAM87297.1, YP_3753 EMBL AAS63901.1, YPO0428 EMBL CAL19109.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length145 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown By similarity. PIRNR PIRNR029225

Sequences

Sequence LengthMass (Da)Tools
Q7CG57 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 69CE1E35B4268B2A

FASTA14516,077
        10         20         30         40         50         60 
MASRRDLLLQ QLGITQWVLR RPAVLQGEIA IHLPEDTRLL IVAQQLPEHG DPLLCDVLRS 

        70         80         90        100        110        120 
LGLTPHQVYA LTPDQVAMLP EDTQCNSWRL GISEPLAVAG AQLHSPELAG LYQDAGAKRA 

       130        140 
LWQQICHYEA DFYPDASRSG HSIPN 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL19109.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM87297.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL19109.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS63901.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS63901.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM87297.1.
AE017042 Genomic DNA. Translation: AAS63901.1.
AL590842 Genomic DNA. Translation: CAL19109.1.
PIRAC0053.
RefSeqNP_671046.1. NC_004088.1.
NP_995024.1. NC_005810.1.
YP_002345504.1. NC_003143.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING214092.YPO0428.

Protocols and materials databases

DNASU1148699.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM87297; AAM87297; y3752.
AAS63901; AAS63901; YP_3753.
GeneID1148699.
1173274.
2765487.
KEGGype:YPO0428.
ypk:y3752.
ypm:YP_3753.
PATRIC18589937. VBIYerPes7843_0706.

Phylogenomic databases

HOGENOMHOG000218328.
KOK02344.
OMAITQWTLR.
OrthoDBEOG6WDSJJ.
ProtClustDBPRK06856.

Enzyme and pathway databases

BioCycYPES214092:GKDD-425-MONOMER.

Family and domain databases

Gene3D3.40.50.10220. 1 hit.
InterProIPR004615. DNA_pol_III_psi.
[Graphical view]
PfamPF03603. DNA_III_psi. 1 hit.
[Graphical view]
PIRSFPIRSF029225. DNA_pol_III_psi. 1 hit.
ProDomPD032475. DNA_pol_III_psi. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF102220. SSF102220. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7CG57_YERPE
AccessionPrimary (citable) accession number: Q7CG57
Secondary accession number(s): Q74PY1
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)