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Q7CG57

- Q7CG57_YERPE

UniProt

Q7CG57 - Q7CG57_YERPE

Protein

DNA polymerase III subunit psi

Gene

holD

Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.UniRule annotation

    GO - Molecular functioni

    1. 3'-5' exonuclease activity Source: InterPro
    2. DNA-directed DNA polymerase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    DNA-directed DNA polymeraseUniRule annotation, Nucleotidyltransferase, Transferase

    Keywords - Biological processi

    DNA replicationUniRule annotation

    Enzyme and pathway databases

    BioCyciYPES214092:GKDD-425-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA polymerase III subunit psiUniRule annotation
    Gene namesi
    Name:holDImported
    Synonyms:b4372Imported
    Ordered Locus Names:y3752Imported, YP_3753Imported, YPO0428Imported
    OrganismiYersinia pestisImported
    Taxonomic identifieri632 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000001019: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi214092.YPO0428.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000218328.
    KOiK02344.
    OMAiITQWTLR.
    OrthoDBiEOG6WDSJJ.

    Family and domain databases

    Gene3Di3.40.50.10220. 1 hit.
    InterProiIPR004615. DNA_pol_III_psi.
    [Graphical view]
    PfamiPF03603. DNA_III_psi. 1 hit.
    [Graphical view]
    PIRSFiPIRSF029225. DNA_pol_III_psi. 1 hit.
    ProDomiPD032475. DNA_pol_III_psi. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF102220. SSF102220. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7CG57-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASRRDLLLQ QLGITQWVLR RPAVLQGEIA IHLPEDTRLL IVAQQLPEHG    50
    DPLLCDVLRS LGLTPHQVYA LTPDQVAMLP EDTQCNSWRL GISEPLAVAG 100
    AQLHSPELAG LYQDAGAKRA LWQQICHYEA DFYPDASRSG HSIPN 145
    Length:145
    Mass (Da):16,077
    Last modified:July 5, 2004 - v1
    Checksum:i69CE1E35B4268B2A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM87297.1.
    AE017042 Genomic DNA. Translation: AAS63901.1.
    AL590842 Genomic DNA. Translation: CAL19109.1.
    PIRiAC0053.
    RefSeqiNP_671046.1. NC_004088.1.
    NP_995024.1. NC_005810.1.
    YP_002345504.1. NC_003143.1.

    Genome annotation databases

    EnsemblBacteriaiAAM87297; AAM87297; y3752.
    AAS63901; AAS63901; YP_3753.
    GeneIDi1148699.
    1173274.
    2765487.
    KEGGiype:YPO0428.
    ypk:y3752.
    ypm:YP_3753.
    PATRICi18589937. VBIYerPes7843_0706.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM87297.1 .
    AE017042 Genomic DNA. Translation: AAS63901.1 .
    AL590842 Genomic DNA. Translation: CAL19109.1 .
    PIRi AC0053.
    RefSeqi NP_671046.1. NC_004088.1.
    NP_995024.1. NC_005810.1.
    YP_002345504.1. NC_003143.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 214092.YPO0428.

    Protocols and materials databases

    DNASUi 1148699.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM87297 ; AAM87297 ; y3752 .
    AAS63901 ; AAS63901 ; YP_3753 .
    GeneIDi 1148699.
    1173274.
    2765487.
    KEGGi ype:YPO0428.
    ypk:y3752.
    ypm:YP_3753.
    PATRICi 18589937. VBIYerPes7843_0706.

    Phylogenomic databases

    HOGENOMi HOG000218328.
    KOi K02344.
    OMAi ITQWTLR.
    OrthoDBi EOG6WDSJJ.

    Enzyme and pathway databases

    BioCyci YPES214092:GKDD-425-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.10220. 1 hit.
    InterProi IPR004615. DNA_pol_III_psi.
    [Graphical view ]
    Pfami PF03603. DNA_III_psi. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF029225. DNA_pol_III_psi. 1 hit.
    ProDomi PD032475. DNA_pol_III_psi. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF102220. SSF102220. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CO92Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KIMImported.
    3. "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
      Delihas N.
      BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CO92Imported.
    4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
      Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
      , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
      DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
    5. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
      Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
      J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 91001Imported.

    Entry informationi

    Entry nameiQ7CG57_YERPE
    AccessioniPrimary (citable) accession number: Q7CG57
    Secondary accession number(s): Q74PY1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3