Q7CFQ2 (Q7CFQ2_YERPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL AAM87623.1
Ordered Locus Names:	y4080 EMBL AAM87623.1, YP_3972 EMBL AAS64112.1, YPO4061 EMBL CAL22634.1

Organism

Yersinia pestis [Reference proteome] [HAMAP]

Taxonomic identifier

632 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	207 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL CAL22634.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7CFQ2 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: AC8CDB4A452415F7	FASTA	207	23,237
	10 20 30 40 50 60 MSYSLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN TVLESFPELA DLSVEDLIKD 70 80 90 100 110 120 LDKVPAEKRT FMRNNAGGHA NHSLFWKGLK LGTTLAGDLK AAIERDFGSV DSFKEKFEQA 130 140 150 160 170 180 AATRFGSGWA WLVLKDDGKL AVVSTANQDS PLMGEAVSGV SGFPIVGLDV WEHAYYLKFQ 190 200 NRRPDYIKAF WNVVNWDEAA ARFAQAK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of Yersinia pestis, the causative agent of plague." Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G. Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL22634.1.
[2]	"Genome sequence of Yersinia pestis KIM." Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. , Matson J.S., Blattner F.R., Perry R.D. J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KIM EMBL AAM87623.1 and KIM10+ / Biovar Mediaevalis.
[3]	"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species." Delihas N. BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CO92 EMBL CAL22634.1.
[4]	"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans." Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R. DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 91001 EMBL AAS64112.1 and 91001 / Biovar Mediaevalis.
[5]	"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus." Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R. J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 91001 EMBL AAS64112.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE009952 Genomic DNA. Translation: AAM87623.1. AE017042 Genomic DNA. Translation: AAS64112.1. AL590842 Genomic DNA. Translation: CAL22634.1.
PIR	AG0493.
RefSeq	NP_671372.1. NC_004088.1. NP_995235.1. NC_005810.1. YP_002348918.1. NC_003143.1.
3D structure databases
HSSP	HSSP built from PDB template 1IX9 based on UniProtKB P00448.
ModBase	Search...
Protein-protein interaction databases
STRING	214092.YPO4061.
Protocols and materials databases
DNASU	1149027.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAM87623; AAM87623; y4080. AAS64112; AAS64112; YP_3972.
GeneID	1149027. 1176894. 2765663.
KEGG	ype:YPO4061. ypk:y4080. ypm:YP_3972.
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
OMA	ETMTIHH.
ProtClustDB	PRK10925.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7CFQ2_YERPE

Accession

Primary (citable) accession number: Q7CFQ2
Secondary accession number(s): Q74PE2

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)