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Q7CFQ2 (Q7CFQ2_YERPE) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodA EMBL AAM87623.1
Ordered Locus Names:y4080 EMBL AAM87623.1, YP_3972 EMBL AAS64112.1, YPO4061 EMBL CAL22634.1
OrganismYersinia pestis [Reference proteome] [HAMAP]
Taxonomic identifier632 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Sequences

Sequence LengthMass (Da)Tools
Q7CFQ2 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: AC8CDB4A452415F7

FASTA20723,237
        10         20         30         40         50         60 
MSYSLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN TVLESFPELA DLSVEDLIKD 

        70         80         90        100        110        120 
LDKVPAEKRT FMRNNAGGHA NHSLFWKGLK LGTTLAGDLK AAIERDFGSV DSFKEKFEQA 

       130        140        150        160        170        180 
AATRFGSGWA WLVLKDDGKL AVVSTANQDS PLMGEAVSGV SGFPIVGLDV WEHAYYLKFQ 

       190        200 
NRRPDYIKAF WNVVNWDEAA ARFAQAK 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Yersinia pestis, the causative agent of plague."
Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G., Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M., Chillingworth T., Cronin A., Davies R.M. expand/collapse author list , Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S., Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.
Nature 413:523-527(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CO-92 / Biovar Orientalis and CO92 EMBL CAL22634.1.
[2]"Genome sequence of Yersinia pestis KIM."
Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L. expand/collapse author list , Matson J.S., Blattner F.R., Perry R.D.
J. Bacteriol. 184:4601-4611(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIM EMBL AAM87623.1 and KIM10+ / Biovar Mediaevalis.
[3]"Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species."
Delihas N.
BMC Microbiol. 3:13-13(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CO92 EMBL CAL22634.1.
[4]"Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R. expand/collapse author list , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 91001 EMBL AAS64112.1 and 91001 / Biovar Mediaevalis.
[5]"Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 91001 EMBL AAS64112.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009952 Genomic DNA. Translation: AAM87623.1.
AE017042 Genomic DNA. Translation: AAS64112.1.
AL590842 Genomic DNA. Translation: CAL22634.1.
PIRAG0493.
RefSeqNP_671372.1. NC_004088.1.
NP_995235.1. NC_005810.1.
YP_002348918.1. NC_003143.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING214092.YPO4061.

Protocols and materials databases

DNASU1149027.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM87623; AAM87623; y4080.
AAS64112; AAS64112; YP_3972.
GeneID1149027.
1176894.
2765663.
KEGGype:YPO4061.
ypk:y4080.
ypm:YP_3972.

Phylogenomic databases

HOGENOMHOG000013583.
KOK04564.
OMADYISAFW.
OrthoDBEOG63NMNT.
ProtClustDBPRK10925.

Enzyme and pathway databases

BioCycYPES214092:GKDD-4029-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7CFQ2_YERPE
AccessionPrimary (citable) accession number: Q7CFQ2
Secondary accession number(s): Q74PE2
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 11, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)