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Protein
Submitted name:

Putative yopH targeting protein

Gene

sycH

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4300-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative yopH targeting proteinImported
Submitted name:
Putative yopH targeting protein SycHImported
Submitted name:
YopH chaperoneImported
Submitted name:
YopH chaperone SycH protein homologImported
Gene namesi
Name:sycHImported
Ordered Locus Names:YPCD1.95cImported
Encoded oniPlasmid pCD1Imported
Plasmid pCD1-pMT1Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000815 Componenti: Plasmid pCD1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TTWX-ray2.38A1-138[»]
4GF3X-ray1.90A1-141[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000219627.
OMAiTISCEPT.
OrthoDBiEOG6P0704.

Family and domain databases

InterProiIPR010261. Tir_chaperone.
[Graphical view]
PfamiPF05932. CesT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7BTX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTYSSLLEE FATELGLEEI ETNELGHGAV TIDKIWVVHL APINEKELVA
60 70 80 90 100
FMRAGILTGQ SQLYDILRKN LFSPLSGVIR CALDKDDHWL LWSQLNINDT
110 120 130 140
SGTQLASVLT SLVDKAVTLS CEPTMKKEED DHRPSSSHLL V
Length:141
Mass (Da):15,763
Last modified:July 5, 2004 - v1
Checksum:iD623C09AB0A72F44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053946 Genomic DNA. Translation: AAC62591.1.
AF074612 Genomic DNA. Translation: AAC69820.1.
HQ612242 Genomic DNA. Translation: ADV16709.1.
AL117189 Genomic DNA. Translation: CAB54972.1.
RefSeqiNP_395224.1. NC_003131.1.
NP_857766.1. NC_004836.1.
NP_857969.1. NC_004839.1.
NP_995406.1. NC_005813.1.
WP_002213267.1. NG_041228.1.
YP_009089050.1. NG_041228.1.

Genome annotation databases

EnsemblBacteriaiAAS58597; AAS58597; YP_pCD87.
GeneIDi1149334.
1172740.
15151816.
KEGGipg:1149334.
pg:15151816.
ype:YPCD1.95c.
ypm:YP_pCD87.
PATRICi18588722. VBIYerPes7843_0106.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053946 Genomic DNA. Translation: AAC62591.1.
AF074612 Genomic DNA. Translation: AAC69820.1.
HQ612242 Genomic DNA. Translation: ADV16709.1.
AL117189 Genomic DNA. Translation: CAB54972.1.
RefSeqiNP_395224.1. NC_003131.1.
NP_857766.1. NC_004836.1.
NP_857969.1. NC_004839.1.
NP_995406.1. NC_005813.1.
WP_002213267.1. NG_041228.1.
YP_009089050.1. NG_041228.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TTWX-ray2.38A1-138[»]
4GF3X-ray1.90A1-141[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi1149334.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS58597; AAS58597; YP_pCD87.
GeneIDi1149334.
1172740.
15151816.
KEGGipg:1149334.
pg:15151816.
ype:YPCD1.95c.
ypm:YP_pCD87.
PATRICi18588722. VBIYerPes7843_0106.

Phylogenomic databases

HOGENOMiHOG000219627.
OMAiTISCEPT.
OrthoDBiEOG6P0704.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4300-MONOMER.

Family and domain databases

InterProiIPR010261. Tir_chaperone.
[Graphical view]
PfamiPF05932. CesT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequencing and analysis of the low-Ca2+-response plasmid pCD1 of Yersinia pestis KIM5."
    Perry R.D., Straley S.C., Fetherston J.D., Rose D.J., Gregor J., Blattner F.R.
    Infect. Immun. 66:4611-4623(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KIM5Imported.
    Plasmid: pCD1
  2. "Structural organization of virulence-associated plasmids of Yersinia pestis."
    Hu P., Elliott J., McCready P., Skowronski E., Garnes J., Kobayashi A., Brubaker R.R., Garcia E.
    J. Bacteriol. 180:5192-5202(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KIM5Imported.
    Plasmid: pCD1
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92Imported, CO-92 / Biovar OrientalisImported and Plasmid pCD1.
  4. "Structure of the Yersinia pestis type III secretion chaperone SycH in complex with a stable fragment of YscM2."
    Phan J., Tropea J.E., Waugh D.S.
    Acta Crystallogr. D 60:1591-1599(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.38 ANGSTROMS) OF 1-138.
  5. "Characterization of pPCP1 Plasmids in Yersinia pestis Strains Isolated from the Former Soviet Union."
    Rajanna C., Revazishvili T., Rashid M.H., Chubinidze S., Bakanidze L., Tsanava S., Imnadze P., Bishop-Lilly K.A., Sozhamannan S., Gibbons H.S., Morris J.G., Sulakvelidze A.
    Int J Microbiol 2010:760819-760819(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C790Imported.
    Plasmid: pCD1-pMT1
  6. "Context-dependent protein folding of a virulence peptide in the bacterial and host environments: structure of an SycH-YopH chaperone-effector complex."
    Vujanac M., Stebbins C.E.
    Acta Crystallogr. D 69:546-554(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).

Entry informationi

Entry nameiQ7BTX0_YERPE
AccessioniPrimary (citable) accession number: Q7BTX0
Secondary accession number(s): Q74YV6, Q7ARG9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.