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Protein
Submitted name:

Putative yopH targeting protein

Gene

sycH

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. pathogenesis Source: InterPro
  2. regulation of protein secretion Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4300-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative yopH targeting proteinImported
Submitted name:
Putative yopH targeting protein SycHImported
Submitted name:
Tir chaperone family proteinImported
Submitted name:
YopH chaperoneImported
Submitted name:
YopH chaperone SycH protein homologImported
Gene namesi
Name:sycHImported
Ordered Locus Names:YP_pCD87Imported, YPCD1.95cImported
ORF Names:BZ15_4356Imported, CH46_4401Imported, CH55_4330Imported, CH59_4444Imported, CH61_4291Imported, CH62_4255Imported, CH63_4329Imported
Encoded oniPlasmid 2Imported
Plasmid pCDImported
Plasmid pCD1Imported
Plasmid pCD1-pMT1Imported
Plasmid plasmid1Imported
Plasmid unnamed2Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000815 Componenti: Plasmid pCD1 UP000001019 Componenti: Plasmid pCD1

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi214092.YPCD1.95c.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TTWX-ray2.38A1-138[»]
4GF3X-ray1.90A1-141[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000219627.
OMAiTISCEPT.
OrthoDBiEOG6P0704.

Family and domain databases

InterProiIPR010261. Tir_chaperone.
[Graphical view]
PfamiPF05932. CesT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7BTX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTYSSLLEE FATELGLEEI ETNELGHGAV TIDKIWVVHL APINEKELVA
60 70 80 90 100
FMRAGILTGQ SQLYDILRKN LFSPLSGVIR CALDKDDHWL LWSQLNINDT
110 120 130 140
SGTQLASVLT SLVDKAVTLS CEPTMKKEED DHRPSSSHLL V
Length:141
Mass (Da):15,763
Last modified:July 5, 2004 - v1
Checksum:iD623C09AB0A72F44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053946 Genomic DNA. Translation: AAC62591.1.
AF074612 Genomic DNA. Translation: AAC69820.1.
AE017043 Genomic DNA. Translation: AAS58597.1.
HQ612242 Genomic DNA. Translation: ADV16709.1.
CP009491 Genomic DNA. Translation: AJI89380.1.
CP009783 Genomic DNA. Translation: AJJ12858.1.
CP009842 Genomic DNA. Translation: AJJ29739.1.
CP009995 Genomic DNA. Translation: AJJ38060.1.
CP009990 Genomic DNA. Translation: AJJ42397.1.
CP009721 Genomic DNA. Translation: AJJ48792.1.
CP009703 Genomic DNA. Translation: AJK06134.1.
AL117189 Genomic DNA. Translation: CAB54972.1.
RefSeqiNP_395224.1. NC_003131.1.
NP_857766.1. NC_004836.1.
NP_857969.1. NC_004839.1.
NP_995406.1. NC_005813.1.
YP_009089050.1. NG_041228.1.

Genome annotation databases

EnsemblBacteriaiAAS58597; AAS58597; YP_pCD87.
GeneIDi1149334.
1172740.
15151816.
KEGGipg:1149334.
pg:15151816.
ype:YPCD1.95c.
ypm:YP_pCD87.
PATRICi18588722. VBIYerPes7843_0106.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF053946 Genomic DNA. Translation: AAC62591.1.
AF074612 Genomic DNA. Translation: AAC69820.1.
AE017043 Genomic DNA. Translation: AAS58597.1.
HQ612242 Genomic DNA. Translation: ADV16709.1.
CP009491 Genomic DNA. Translation: AJI89380.1.
CP009783 Genomic DNA. Translation: AJJ12858.1.
CP009842 Genomic DNA. Translation: AJJ29739.1.
CP009995 Genomic DNA. Translation: AJJ38060.1.
CP009990 Genomic DNA. Translation: AJJ42397.1.
CP009721 Genomic DNA. Translation: AJJ48792.1.
CP009703 Genomic DNA. Translation: AJK06134.1.
AL117189 Genomic DNA. Translation: CAB54972.1.
RefSeqiNP_395224.1. NC_003131.1.
NP_857766.1. NC_004836.1.
NP_857969.1. NC_004839.1.
NP_995406.1. NC_005813.1.
YP_009089050.1. NG_041228.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TTWX-ray2.38A1-138[»]
4GF3X-ray1.90A1-141[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi214092.YPCD1.95c.

Protocols and materials databases

DNASUi1149334.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS58597; AAS58597; YP_pCD87.
GeneIDi1149334.
1172740.
15151816.
KEGGipg:1149334.
pg:15151816.
ype:YPCD1.95c.
ypm:YP_pCD87.
PATRICi18588722. VBIYerPes7843_0106.

Phylogenomic databases

HOGENOMiHOG000219627.
OMAiTISCEPT.
OrthoDBiEOG6P0704.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-4300-MONOMER.

Family and domain databases

InterProiIPR010261. Tir_chaperone.
[Graphical view]
PfamiPF05932. CesT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequencing and analysis of the low-Ca2+-response plasmid pCD1 of Yersinia pestis KIM5."
    Perry R.D., Straley S.C., Fetherston J.D., Rose D.J., Gregor J., Blattner F.R.
    Infect. Immun. 66:4611-4623(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KIM5Imported.
    Plasmid: pCD1
  2. "Structural organization of virulence-associated plasmids of Yersinia pestis."
    Hu P., Elliott J., McCready P., Skowronski E., Garnes J., Kobayashi A., Brubaker R.R., Garcia E.
    J. Bacteriol. 180:5192-5202(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KIM5Imported.
    Plasmid: pCD1
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92Imported, CO-92 / Biovar OrientalisImported and Plasmid pCD1.
  4. "Structure of the Yersinia pestis type III secretion chaperone SycH in complex with a stable fragment of YscM2."
    Phan J., Tropea J.E., Waugh D.S.
    Acta Crystallogr. D 60:1591-1599(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.38 ANGSTROMS) OF 1-138.
  5. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported, pCD1 and Plasmid pCD1.
  6. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
    Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
    J. Bacteriol. 186:5147-5152(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 91001Imported.
    Plasmid: pCD1
  7. "Characterization of pPCP1 Plasmids in Yersinia pestis Strains Isolated from the Former Soviet Union."
    Rajanna C., Revazishvili T., Rashid M.H., Chubinidze S., Bakanidze L., Tsanava S., Imnadze P., Bishop-Lilly K.A., Sozhamannan S., Gibbons H.S., Morris J.G., Sulakvelidze A.
    Int J Microbiol 2010:760819-760819(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C790Imported.
    Plasmid: pCD1-pMT1
  8. "Context-dependent protein folding of a virulence peptide in the bacterial and host environments: structure of an SycH-YopH chaperone-effector complex."
    Vujanac M., Stebbins C.E.
    Acta Crystallogr. D 69:546-554(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  9. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Harbin35Imported.
    Plasmid: unnamed2
  10. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PBM19Imported.
    Plasmid: pCD1
  11. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ShastaImported.
    Plasmid: pCD
  12. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: El DoradoImported.
    Plasmid: pCD
  13. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Java9Imported and Nicholisk 41Imported.
    Plasmid: 2 plasmid1
  14. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DodsonImported.
    Plasmid: pCD

Entry informationi

Entry nameiQ7BTX0_YERPE
AccessioniPrimary (citable) accession number: Q7BTX0
Secondary accession number(s): Q74YV6, Q7ARG9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 1, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.