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Protein

Uncharacterized HTH-type transcriptional regulator SA0097

Gene

SA0097

Organism
Staphylococcus aureus (strain N315)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi161 – 18020H-T-H motifPROSITE-ProRule annotationAdd
BLAST
DNA bindingi210 – 23324H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSAUR158879:GJCB-101-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator SA0097
Gene namesi
Ordered Locus Names:SA0097
OrganismiStaphylococcus aureus (strain N315)
Taxonomic identifieri158879 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000000751 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 745745Uncharacterized HTH-type transcriptional regulator SA0097PRO_0000194629Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ7A882.
SMRiQ7A882. Positions 20-75, 165-254.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 HTH araC/xylS-type DNA-binding domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000279705.
OMAiCANINPR.
OrthoDBiEOG676Z0D.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003313. AraC-bd.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51215. SSF51215. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7A882-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRDYLIRVE TESMPDFKRL NGLMIGFVIK GEAHIYDENN MTQCNSGDIF
60 70 80 90 100
IINHRDLYRF QLQQDGIICY IQFQMKYLAD KFDDAHCLYF HLTDATTTKN
110 120 130 140 150
IHQLRNIMAR LVSTHIRHNE LSKLTEQQLV IQLLMHMIHY VPRTYHSNQS
160 170 180 190 200
ILNDDKVNQV CDYIELHFHE DLSLSELSEY VGWSESHLSK KFTESLGVGF
210 220 230 240 250
QHFLNTTRIE HAKLDLTYTD ETITDIALQN GFSSAASFAR TFKHFTHQTP
260 270 280 290 300
KQYRGDRPAI TENQQSAQHN YHDRELILLL NDYIEEMNHF IEDIEKMNYK
310 320 330 340 350
EIAFKPTNQQ LNQFNHIIQV GYLRNLLNTQ YQSQLLTCHH DFQVNEVLAY
360 370 380 390 400
DVMPYIMKKL NAPFTYDAEI SNIFYDIDLC LDFLLDHNFS LTMHLNQYDS
410 420 430 440 450
RDYIDAFKVF IHHVALHVSH RKDLKFNLYV TTLHTSLIEM IDYFKALFPN
460 470 480 490 500
GGLYIHLDQA TERHLPLLKR LEPHINHFVF DANSNDAVDF NKMNDDEFKT
510 520 530 540 550
ASQMIINKTN YLIDLMHRHN LKRPLILLNW NTLTGDTFIT NGEYFRGGII
560 570 580 590 600
IEQLLKLSTK VEGIGYWLNY DLHVSHCRNE RDYMNSIELF HQYNGKRPVY
610 620 630 640 650
FTALLFNKLT SNILYSDDTC IVTGTDSNFQ ILLYDAKHFN PYLALDNQMN
660 670 680 690 700
MRATEMIHLN INALEDGMYK IKHFTLDKEN GALFNLWRKH HTIHGMDKDS
710 720 730 740
IDYVNRMSFP KLEVYDIDIT DTLALNIKMI TNGIHLIEVK RYPSS
Length:745
Mass (Da):87,878
Last modified:July 5, 2004 - v1
Checksum:i73AE9BAD975DD3C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000018 Genomic DNA. Translation: BAB41316.1.
PIRiA89770.
RefSeqiWP_001188472.1. NC_002745.2.

Genome annotation databases

EnsemblBacteriaiBAB41316; BAB41316; BAB41316.
PATRICi19572225. VBIStaAur116463_0102.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000018 Genomic DNA. Translation: BAB41316.1.
PIRiA89770.
RefSeqiWP_001188472.1. NC_002745.2.

3D structure databases

ProteinModelPortaliQ7A882.
SMRiQ7A882. Positions 20-75, 165-254.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB41316; BAB41316; BAB41316.
PATRICi19572225. VBIStaAur116463_0102.

Phylogenomic databases

HOGENOMiHOG000279705.
OMAiCANINPR.
OrthoDBiEOG676Z0D.

Enzyme and pathway databases

BioCyciSAUR158879:GJCB-101-MONOMER.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003313. AraC-bd.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51215. SSF51215. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: N315.

Entry informationi

Entry nameiY097_STAAN
AccessioniPrimary (citable) accession number: Q7A882
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: July 5, 2004
Last modified: March 16, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.