Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

ATP synthase subunit alpha

Gene

atpA

Organism
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.UniRule annotation

Catalytic activityi

ATP + H2O + H+(In) = ADP + phosphate + H+(Out).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sitei373Required for activityUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi172 – 179ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

ATP synthesis, Hydrogen ion transport, Ion transport, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciCORYNE:G18NG-10783-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit alphaUniRule annotation (EC:3.6.3.14UniRule annotation)
Alternative name(s):
ATP synthase F1 sector subunit alphaUniRule annotation
F-ATPase subunit alphaUniRule annotation
Gene namesi
Name:atpAUniRule annotation
Ordered Locus Names:Cgl1210, cg1366
OrganismiCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Taxonomic identifieri196627 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000000582 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, CF(1), Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003026421 – 547ATP synthase subunit alphaAdd BLAST547

2D gel databases

World-2DPAGE0001:Q79VG7.

Interactioni

Subunit structurei

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

Protein-protein interaction databases

STRINGi196627.cg1366.

Structurei

3D structure databases

ProteinModelPortaliQ79VG7.
SMRiQ79VG7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATPase alpha/beta chains family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CDG. Bacteria.
COG0056. LUCA.
HOGENOMiHOG000130111.
KOiK02111.
OMAiQVVSIWA.

Family and domain databases

CDDicd01132. F1_ATPase_alpha. 1 hit.
Gene3Di2.40.30.20. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_01346. ATP_synth_alpha_bact. 1 hit.
InterProiIPR023366. ATP_synth_asu-like.
IPR000793. ATP_synth_asu_C.
IPR033732. ATP_synth_F1_a.
IPR005294. ATP_synth_F1_asu.
IPR020003. ATPase_a/bsu_AS.
IPR004100. ATPase_F1/V1/A1_a/bsu_N.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR15184:SF3. PTHR15184:SF3. 1 hit.
PfamiPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SUPFAMiSSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00962. atpA. 1 hit.
PROSITEiPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q79VG7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAELTISSDE IRSAIANYTS SYSAEASREE VGVVISAADG IAQVSGLPSV
60 70 80 90 100
MANELLEFPG GVIGVAQNLE ADRVGVVVLG NYELLKEGDQ VRRTGDVLSI
110 120 130 140 150
PVGEAFLGRV INPLGQPIDG LGEIASEEDR VLELQAPTVL ERQPVEEPLA
160 170 180 190 200
TGIKAIDAMT PIGRGQRQLI IGDRKTGKTA VCVDTILNQK ANWETGDKTK
210 220 230 240 250
QVRCIYVAIG QKGSTIAALR KTLEEQGALE YTTIVAAPAS DAAGFKWLAP
260 270 280 290 300
FAGAALAQHW MYQGNHVLVI YDDLTKQAEA YRAISLLLRR PPGREAYPGD
310 320 330 340 350
VFYLHSRLLE RAAKLSDELG AGSITALPII ETKANDVSAF IPTNVISITD
360 370 380 390 400
GQVFLESDLF NRGVRPAINV GVSVSRVGGA AQTKGMKKVA GSLRLDLAAF
410 420 430 440 450
RDLEAFATFA SDLDAASKSQ LERGQRLVQL LIQSENAPQA VEYQIISLWL
460 470 480 490 500
AGEGAFDNVP VEDVRRFESE LHEYLGSNAA QVYEQIAGGA QLSDESKETL
510 520 530 540
LKATEDFKSA FQTTDGTPVI NEPEVEALDA GQVKKDQLTV SRKVSKK
Length:547
Mass (Da):58,751
Last modified:July 5, 2004 - v1
Checksum:i2E536F0EF671B7D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB046112 Genomic DNA. Translation: BAB08155.1.
BA000036 Genomic DNA. Translation: BAB98603.1.
BX927151 Genomic DNA. Translation: CAF19914.1.
RefSeqiNP_600435.2. NC_003450.3.
WP_011014202.1. NC_006958.1.

Genome annotation databases

EnsemblBacteriaiBAB98603; BAB98603; BAB98603.
CAF19914; CAF19914; cg1366.
GeneIDi1019193.
KEGGicgb:cg1366.
cgl:NCgl1163.
PATRICi21494466. VBICorGlu203724_1189.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB046112 Genomic DNA. Translation: BAB08155.1.
BA000036 Genomic DNA. Translation: BAB98603.1.
BX927151 Genomic DNA. Translation: CAF19914.1.
RefSeqiNP_600435.2. NC_003450.3.
WP_011014202.1. NC_006958.1.

3D structure databases

ProteinModelPortaliQ79VG7.
SMRiQ79VG7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196627.cg1366.

2D gel databases

World-2DPAGE0001:Q79VG7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB98603; BAB98603; BAB98603.
CAF19914; CAF19914; cg1366.
GeneIDi1019193.
KEGGicgb:cg1366.
cgl:NCgl1163.
PATRICi21494466. VBICorGlu203724_1189.

Phylogenomic databases

eggNOGiENOG4105CDG. Bacteria.
COG0056. LUCA.
HOGENOMiHOG000130111.
KOiK02111.
OMAiQVVSIWA.

Enzyme and pathway databases

BioCyciCORYNE:G18NG-10783-MONOMER.

Family and domain databases

CDDicd01132. F1_ATPase_alpha. 1 hit.
Gene3Di2.40.30.20. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_01346. ATP_synth_alpha_bact. 1 hit.
InterProiIPR023366. ATP_synth_asu-like.
IPR000793. ATP_synth_asu_C.
IPR033732. ATP_synth_F1_a.
IPR005294. ATP_synth_F1_asu.
IPR020003. ATPase_a/bsu_AS.
IPR004100. ATPase_F1/V1/A1_a/bsu_N.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR15184:SF3. PTHR15184:SF3. 1 hit.
PfamiPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SUPFAMiSSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00962. atpA. 1 hit.
PROSITEiPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiATPA_CORGL
AccessioniPrimary (citable) accession number: Q79VG7
Secondary accession number(s): Q9FDR7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: July 5, 2004
Last modified: November 30, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.