Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative potassium channel protein YugO

Gene

yugO

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Potassium channel

Keywords - Biological processi

Ion transport, Potassium transport, Transport

Keywords - Ligandi

Potassium

Enzyme and pathway databases

BioCyciBSUB:BSU31322-MONOMER.

Protein family/group databases

TCDBi1.A.1.13.4. the voltage-gated ion channel (vic) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative potassium channel protein YugO
Gene namesi
Name:yugO
Ordered Locus Names:BSU31322
ORF Names:BSU31320
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei19 – 3921HelicalSequence analysisAdd
BLAST
Transmembranei42 – 6221HelicalSequence analysisAdd
BLAST
Transmembranei73 – 9321HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 328328Putative potassium channel protein YugOPRO_0000390882Add
BLAST

Proteomic databases

PaxDbiQ795M8.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017026.

Structurei

3D structure databases

ProteinModelPortaliQ795M8.
SMRiQ795M8. Positions 18-328.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini116 – 245130RCK N-terminalPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 RCK N-terminal domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107PBV. Bacteria.
COG1226. LUCA.
HOGENOMiHOG000098412.
InParanoidiQ795M8.
KOiK10716.
OMAiVFEGIWW.
OrthoDBiEOG6DNT6Q.
PhylomeDBiQ795M8.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR013099. K_chnl_dom.
IPR016040. NAD(P)-bd_dom.
IPR003148. RCK_N.
IPR028325. VG_K_chnl.
[Graphical view]
PfamiPF07885. Ion_trans_2. 1 hit.
PF02254. TrkA_N. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS51201. RCK_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q795M8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSNRIFISW LRWPLFIRIG VIILCLILLF GQIIYILEPK QFTSVFEGIW
60 70 80 90 100
WAVVTVSTVG YGDYVPHTPL GQAAGILLIL SGASFVTAYF ATLSAAAFSR
110 120 130 140 150
QHRYIEGKVA YKGRDHIILI GWNEKTNRLL KDLQLAAPSK TVVLIDESLT
160 170 180 190 200
EGPLIENVHF IRGHAADDGT LKRANITEAE SVMITADQYK SETDADMLSV
210 220 230 240 250
LTLLSVKGLN PLAYCIVEIL TDRFVTNAER AGANQIIGTS EFISRAMLQH
260 270 280 290 300
YQVKLRPSKQ QNGIKLTLDQ HVELLAVPDE LKGAAYKTCV LYFLDHNTTI
310 320
IGIQKKEGPM LSPPLTYKVL ETDQFLAI
Length:328
Mass (Da):36,579
Last modified:May 5, 2009 - v2
Checksum:i1C7CFEDC4D4C8E31
GO

Sequence cautioni

The sequence CAB07933.1 differs from that shown. Reason: Frameshift at position 257. Curated
The sequence CAB07933.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93936 Genomic DNA. Translation: CAB07933.1. Sequence problems.
AL009126 Genomic DNA. Translation: CAB15121.3.
RefSeqiNP_391010.3. NC_000964.3.
WP_003242502.1. NZ_JNCM01000033.1.

Genome annotation databases

EnsemblBacteriaiCAB15121; CAB15121; BSU31322.
GeneIDi938842.
KEGGibsu:BSU31322.
PATRICi18978232. VBIBacSub10457_3279.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93936 Genomic DNA. Translation: CAB07933.1. Sequence problems.
AL009126 Genomic DNA. Translation: CAB15121.3.
RefSeqiNP_391010.3. NC_000964.3.
WP_003242502.1. NZ_JNCM01000033.1.

3D structure databases

ProteinModelPortaliQ795M8.
SMRiQ795M8. Positions 18-328.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017026.

Protein family/group databases

TCDBi1.A.1.13.4. the voltage-gated ion channel (vic) superfamily.

Proteomic databases

PaxDbiQ795M8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15121; CAB15121; BSU31322.
GeneIDi938842.
KEGGibsu:BSU31322.
PATRICi18978232. VBIBacSub10457_3279.

Phylogenomic databases

eggNOGiENOG4107PBV. Bacteria.
COG1226. LUCA.
HOGENOMiHOG000098412.
InParanoidiQ795M8.
KOiK10716.
OMAiVFEGIWW.
OrthoDBiEOG6DNT6Q.
PhylomeDBiQ795M8.

Enzyme and pathway databases

BioCyciBSUB:BSU31322-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR013099. K_chnl_dom.
IPR016040. NAD(P)-bd_dom.
IPR003148. RCK_N.
IPR028325. VG_K_chnl.
[Graphical view]
PfamiPF07885. Ion_trans_2. 1 hit.
PF02254. TrkA_N. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS51201. RCK_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Bacillus subtilis genome: cloning and nucleotide sequence of a 62 kb region between 275 degrees (rrnB) and 284 degrees (pai)."
    Oudega B., Koningstein G., Rodrigues L., de Sales Ramon M., Hilbert H., Duesterhoeft A., Pohl T.M., Weitzenegger T.
    Microbiology 143:2769-2774(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYUGO_BACSU
AccessioniPrimary (citable) accession number: Q795M8
Secondary accession number(s): O05247
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 19, 2010
Last sequence update: May 5, 2009
Last modified: February 17, 2016
This is version 79 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.