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Q78PG9

- CCD25_MOUSE

UniProt

Q78PG9 - CCD25_MOUSE

Protein

Coiled-coil domain-containing protein 25

Gene

Ccdc25

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (25 Oct 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Coiled-coil domain-containing protein 25
    Gene namesi
    Name:Ccdc25
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 14

    Organism-specific databases

    MGIiMGI:1914429. Ccdc25.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 208208Coiled-coil domain-containing protein 25PRO_0000233405Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei23 – 231N6-acetyllysineBy similarity
    Modified residuei204 – 2041Phosphoserine1 Publication

    Keywords - PTMi

    Acetylation, Phosphoprotein

    Proteomic databases

    MaxQBiQ78PG9.
    PaxDbiQ78PG9.
    PRIDEiQ78PG9.

    PTM databases

    PhosphoSiteiQ78PG9.

    Expressioni

    Gene expression databases

    ArrayExpressiQ78PG9.
    BgeeiQ78PG9.
    CleanExiMM_CCDC25.
    GenevestigatoriQ78PG9.

    Interactioni

    Protein-protein interaction databases

    IntActiQ78PG9. 1 interaction.

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili117 – 18771Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the CCDC25 family.Curated

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiNOG288654.
    GeneTreeiENSGT00390000004380.
    HOGENOMiHOG000041378.
    HOVERGENiHBG057190.
    InParanoidiQ78PG9.
    OMAiIRWGWPE.
    OrthoDBiEOG7PVWQT.
    PhylomeDBiQ78PG9.
    TreeFamiTF300013.

    Family and domain databases

    InterProiIPR008532. DUF814.
    [Graphical view]
    PfamiPF05670. DUF814. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q78PG9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVFYFTSSSV NSSTYTIYMG KDKYENEDLI KYGWPEDIWF HVDKLSSAHV    50
    YLRLQKGEKI EDIPKEVLMD CAHLVKANSI QGCKMNNVNV VYTPWSNLKK 100
    TADMDVGQIG FHRQKDVKIV TVEKKVNEIL NRLEKTKLEK FPDLAAEKEG 150
    RDREERNEKK AQIQEMKRKE KEEMKKKREM DELRSYSSLM KVENMSSNQD 200
    GNDSDEFM 208
    Length:208
    Mass (Da):24,480
    Last modified:October 25, 2004 - v1
    Checksum:i60FF54684E72337F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti156 – 1561R → G in BAB30178. (PubMed:16141072)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK012172 mRNA. Translation: BAB28076.1.
    AK016286 mRNA. Translation: BAB30178.1.
    AK078345 mRNA. Translation: BAC37230.1.
    AK089982 mRNA. Translation: BAC41026.1.
    CCDSiCCDS27217.1.
    RefSeqiNP_666056.1. NM_145944.4.
    UniGeneiMm.214576.

    Genome annotation databases

    EnsembliENSMUST00000022614; ENSMUSP00000022614; ENSMUSG00000022035.
    GeneIDi67179.
    KEGGimmu:67179.
    UCSCiuc007ujq.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK012172 mRNA. Translation: BAB28076.1 .
    AK016286 mRNA. Translation: BAB30178.1 .
    AK078345 mRNA. Translation: BAC37230.1 .
    AK089982 mRNA. Translation: BAC41026.1 .
    CCDSi CCDS27217.1.
    RefSeqi NP_666056.1. NM_145944.4.
    UniGenei Mm.214576.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q78PG9. 1 interaction.

    PTM databases

    PhosphoSitei Q78PG9.

    Proteomic databases

    MaxQBi Q78PG9.
    PaxDbi Q78PG9.
    PRIDEi Q78PG9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000022614 ; ENSMUSP00000022614 ; ENSMUSG00000022035 .
    GeneIDi 67179.
    KEGGi mmu:67179.
    UCSCi uc007ujq.1. mouse.

    Organism-specific databases

    CTDi 55246.
    MGIi MGI:1914429. Ccdc25.

    Phylogenomic databases

    eggNOGi NOG288654.
    GeneTreei ENSGT00390000004380.
    HOGENOMi HOG000041378.
    HOVERGENi HBG057190.
    InParanoidi Q78PG9.
    OMAi IRWGWPE.
    OrthoDBi EOG7PVWQT.
    PhylomeDBi Q78PG9.
    TreeFami TF300013.

    Miscellaneous databases

    ChiTaRSi CCDC25. mouse.
    NextBioi 323808.
    PROi Q78PG9.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q78PG9.
    Bgeei Q78PG9.
    CleanExi MM_CCDC25.
    Genevestigatori Q78PG9.

    Family and domain databases

    InterProi IPR008532. DUF814.
    [Graphical view ]
    Pfami PF05670. DUF814. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Cerebellum and Kidney.
    2. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-204, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Embryonic brain.

    Entry informationi

    Entry nameiCCD25_MOUSE
    AccessioniPrimary (citable) accession number: Q78PG9
    Secondary accession number(s): Q9CSQ8, Q9CUF8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 2, 2006
    Last sequence update: October 25, 2004
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3