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Q775J6 (Q775J6_9PAPI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

L1 major capsid protein EMBL CAU03651.1

L1 protein EMBL CBY85394.1

Major capsid protein EMBL AAC80439.1

Major capsid protein L1 EMBL AAK01850.1
Gene names
Name:L1 EMBL CAS89460.1
OrganismHuman papillomavirus type 6 EMBL AAK01850.1
Taxonomic identifier31552 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stagePapillomaviridaeAlphapapillomavirus

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q775J6 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: B6168D0F76A287F7

FASTA50055,597
        10         20         30         40         50         60 
MWRPSDSTVY VPPPNPVSKV VATDAYVTRT NIFYHASSSR LLAVGHPYFS IKRANKTVVP 

        70         80         90        100        110        120 
KVSGYQYRVF KVVLPDPNKF ALPDSSLFDP TTQRLVWACT GLEVGRGQPL GVGVSGHPFL 

       130        140        150        160        170        180 
NKYDDVENSG SGGNPGQDNR VNVGMDYKQT QLCMVGCAPP LGEHWGKGKQ CTNTPVQAGD 

       190        200        210        220        230        240 
CPPLELITSV IQDGDMVDTG FGAMNFADLQ TNKSDVPIDI CGTTCKYPDY LQMAADPYGD 

       250        260        270        280        290        300 
RLFFFLRKEQ MFARHFFNRA GEVGEPVPDT LIIKGSGNRT SVGSSIYVNT PSGSLVSSEA 

       310        320        330        340        350        360 
QLFNKPYWLQ KAQGHNNGIC WGNQLFVTVV DTTRSTNMTL CASVTTSSTY TNSDYKEYMR 

       370        380        390        400        410        420 
HVEEYDLQFI FQLCSITLSA EVMAYIHTMN PSVLEDWNFG LSPPPNGTLE DTYRYVQSQA 

       430        440        450        460        470        480 
ITCQKPTPEK EKPDPYKNLS FWEVNLKEKF SSELDQYPLG RKFLLQSGYR GRSSIRTGVK 

       490        500 
RPAVSKASAA PKRKRAKTKR 

« Hide

References

[1]"Intratype sequence variation among clinical isolates of the human papillomavirus type 6 L1 ORF: clustering of mutations and identification of a frequent amino acid sequence variant."
Caparros-Wanderley W., Savage N., Hill-Perkins M., Layton G., Weber J., Davies D.H.
J. Gen. Virol. 80:1025-1033(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Assay and L1 gene sequence analysis of human papillomavirus type 6 and 11 in condylomata acuminata."
Mingce Z., Yuehua L., Shide L.
Zhongguo Yi Xue Ke Xue Yuan Xue Bao 22:463-466(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"HPV-6 late genes."
Wang M., Song G.X.
Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Jinzhou EMBL AAK01850.1.
Tissue: Condyloma accuminatum EMBL AAK01850.1.
[4]Mingce Z., Shide L., Guoxing S.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Prevaccination genomic diversity of human papillomavirus genotype 6 (HPV 6)."
Kocjan B.J., Poljak M., Cimerman M., Gale N., Potocnik M., Bogovac Z., Seme K.
Virology 391:274-283(2009)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CAC11 EMBL CAS89460.1, CAC116X EMBL CAS89476.1, CAC21 EMBL CAS89461.1, CAC21z EMBL CAS89493.1, CAC226 EMBL CAS89463.1, CAC231 EMBL CAS89477.1, CAC236 EMBL CAS89490.1, CAC23z EMBL CAS89485.1, CAC26 EMBL CAS89492.1, CAC271 EMBL CAS89481.1, CAC276 EMBL CAS89483.1, CAC281 EMBL CAS89467.1, CAC286 EMBL CAS89468.1, CAC291 EMBL CAS89469.1, CAC296 EMBL CAS89470.1, CAC306 EMBL CAS89475.1, CAC31 EMBL CAS89480.1, CAC316 EMBL CAS89471.1, CAC326 EMBL CAS89472.1, CAC32z EMBL CAS89494.1, CAC341 EMBL CAS89473.1, CAC36 EMBL CAS89464.1, CAC361 EMBL CAS89474.1, CAC366-1 EMBL CAS89482.1, CAC377 EMBL CAS89489.1, CAC41 EMBL CAS89465.1, CAC44z EMBL CAS89495.1, CAC46 EMBL CAS89484.1, CAC46z EMBL CAS89496.1, CAC51 EMBL CAS89462.1, CAC56 EMBL CAS89488.1, CAC6 EMBL CAS89479.1, CAC76 EMBL CAS89466.1, CAC91 EMBL CAS89478.1, CAC96 EMBL CAS89486.1, LP10 EMBL CAU03666.1, LP100 EMBL CAU03680.1, LP101 EMBL CAU03677.1, LP104 EMBL CAU03672.1, LP109 EMBL CAU03673.1, LP11 EMBL CAU03674.1, LP127 EMBL CAU03651.1, LP129 EMBL CAU03652.1, LP130 EMBL CAU03653.1, LP137 EMBL CAU03654.1, LP143 EMBL CAU03655.1, LP145 EMBL CAU03656.1, LP184 EMBL CAU03658.1, LP189 EMBL CAU03676.1, LP22 EMBL CAU03657.1, LP23 EMBL CAU03667.1, LP26 EMBL CAU03661.1, LP28 EMBL CAU03675.1, LP4 EMBL CAU03668.1, LP5 EMBL CAU03660.1, LP66 EMBL CAU03669.1, LP69 EMBL CAU03679.1, LP73 EMBL CAU03670.1, LP88 EMBL CAU03659.1, LP92 EMBL CAU03665.1, LP93 EMBL CAU03671.1, LP94 EMBL CAU03681.1, LP96 EMBL CAU03682.1 and LP98 EMBL CAU03678.1.
[6]Jelen M.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CAC11 EMBL CBY85520.1, CAC231 EMBL CBY85538.1, CAC23z EMBL CBY85484.1, CAC26 EMBL CBY85412.1, CAC306 EMBL CBY85547.1, CAC377 EMBL CBY85439.1, CAC56 EMBL CBY85448.1, CAC96 EMBL CBY85529.1, LP11 EMBL CBY85475.1, LP130 EMBL CBY85421.1, LP137 EMBL CBY85493.1, LP176 EMBL CBY85511.1, LP26 EMBL CBY85394.1, LP5 EMBL CBY85430.1, LP96 EMBL CBY85502.1 and LP98 EMBL CBY85556.1.
[7]"Pre-vaccination genomic diversity of human papillomavirus genotype 6 (HPV 6): A comparative analysis of 21 full-length genome sequences."
Kocjan B.J., Jelen M.M., Maver P.J., Seme K., Poljak M.
Infect. Genet. Evol. 11:1805-1810(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CAC11 EMBL CBY85520.1, CAC231 EMBL CBY85538.1, CAC23z EMBL CBY85484.1, CAC26 EMBL CBY85412.1, CAC306 EMBL CBY85547.1, CAC377 EMBL CBY85439.1, CAC56 EMBL CBY85448.1, CAC96 EMBL CBY85529.1, LP11 EMBL CBY85475.1, LP130 EMBL CBY85421.1, LP137 EMBL CBY85493.1, LP176 EMBL CBY85511.1, LP26 EMBL CBY85394.1, LP5 EMBL CBY85430.1, LP96 EMBL CBY85502.1 and LP98 EMBL CBY85556.1.
[8]"Lack of methylation in the upstream region of human papillomavirus type 6 from aerodigestive tract papillomas."
Ure A.E., Forslund O.
J. Virol. 86:13790-13794(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PV1499 EMBL AFL92007.1, PV1666 EMBL AFL91953.1, PV1732 EMBL AFL91998.1, PV2345 EMBL AFL91935.1 and PV2702 EMBL AFL92016.1.
[9]"Identical human papillomavirus (HPV) genomic variants persist in recurrent respiratory papillomatosis for up to 22 years."
Kocjan B.J., Gale N., Hocevar Boltezar I., Seme K., Fujs Komlos K., Hosnjak L., Maver P.J., Jelen M.M., Zupanic Pajnic I., Balazic J., Poljak M.
J. Infect. Dis. 207:583-587(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: LP112 EMBL CCD42228.1, LP139 EMBL CCD42075.1, LP143 EMBL CCD42084.1, LP145 EMBL CCD42120.1, LP148 EMBL CCD42093.1, LP15 EMBL CCD42174.1, LP173 EMBL CCD42192.1, LP178 EMBL CCD42201.1, LP182 EMBL CCD42210.1, LP183 EMBL CCD42102.1, LP210 EMBL CCD42147.1, LP211 EMBL CCJ09358.1, LP22 EMBL CCD42057.1, LP223 EMBL CCD42219.1, LP23 EMBL CCD42156.1, LP230 EMBL CCD42165.1, LP231 EMBL CCD42129.1, LP237 EMBL CCD42066.1, LP238 EMBL CCJ09367.1, LP240 EMBL CCD42183.1, LP243 EMBL CCD42111.1, LP244 EMBL CCD42237.1, LP3 EMBL CCD42138.1, LPX26 EMBL CCJ09385.1, LPX29 EMBL CCJ09376.1, LPX32 EMBL CCJ09349.1 and LPX44 EMBL CCJ09331.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF067036 Genomic DNA. Translation: AAC80439.1.
AF067037 Genomic DNA. Translation: AAC80440.1.
AF067038 Genomic DNA. Translation: AAC80441.1.
AF067043 Genomic DNA. Translation: AAC80446.1.
AF067050 Genomic DNA. Translation: AAC80453.1.
AY015006 Genomic DNA. Translation: AAK01850.1.
AF335604 Genomic DNA. Translation: AAK21270.1.
JN252314 Genomic DNA. Translation: AFL91935.1.
JN252316 Genomic DNA. Translation: AFL91953.1.
JN252321 Genomic DNA. Translation: AFL91998.1.
JN252322 Genomic DNA. Translation: AFL92007.1.
JN252323 Genomic DNA. Translation: AFL92016.1.
FM876129 Genomic DNA. Translation: CAS89460.1.
FM876130 Genomic DNA. Translation: CAS89461.1.
FM876131 Genomic DNA. Translation: CAS89462.1.
FM876132 Genomic DNA. Translation: CAS89463.1.
FM876133 Genomic DNA. Translation: CAS89464.1.
FM876134 Genomic DNA. Translation: CAS89465.1.
FM876135 Genomic DNA. Translation: CAS89466.1.
FM876136 Genomic DNA. Translation: CAS89467.1.
FM876137 Genomic DNA. Translation: CAS89468.1.
FM876138 Genomic DNA. Translation: CAS89469.1.
FM876139 Genomic DNA. Translation: CAS89470.1.
FM876140 Genomic DNA. Translation: CAS89471.1.
FM876141 Genomic DNA. Translation: CAS89472.1.
FM876142 Genomic DNA. Translation: CAS89473.1.
FM876143 Genomic DNA. Translation: CAS89474.1.
FM876144 Genomic DNA. Translation: CAS89475.1.
FM876145 Genomic DNA. Translation: CAS89476.1.
FM876146 Genomic DNA. Translation: CAS89477.1.
FM876147 Genomic DNA. Translation: CAS89478.1.
FM876148 Genomic DNA. Translation: CAS89479.1.
FM876149 Genomic DNA. Translation: CAS89480.1.
FM876150 Genomic DNA. Translation: CAS89481.1.
FM876151 Genomic DNA. Translation: CAS89482.1.
FM876152 Genomic DNA. Translation: CAS89483.1.
FM876153 Genomic DNA. Translation: CAS89484.1.
FM876154 Genomic DNA. Translation: CAS89485.1.
FM876155 Genomic DNA. Translation: CAS89486.1.
FM876157 Genomic DNA. Translation: CAS89488.1.
FM876158 Genomic DNA. Translation: CAS89489.1.
FM876159 Genomic DNA. Translation: CAS89490.1.
FM876161 Genomic DNA. Translation: CAS89492.1.
FM876162 Genomic DNA. Translation: CAS89493.1.
FM876163 Genomic DNA. Translation: CAS89494.1.
FM876164 Genomic DNA. Translation: CAS89495.1.
FM876165 Genomic DNA. Translation: CAS89496.1.
FM897134 Genomic DNA. Translation: CAU03651.1.
FM897135 Genomic DNA. Translation: CAU03652.1.
FM897136 Genomic DNA. Translation: CAU03653.1.
FM897137 Genomic DNA. Translation: CAU03654.1.
FM897138 Genomic DNA. Translation: CAU03655.1.
FM897139 Genomic DNA. Translation: CAU03656.1.
FM897140 Genomic DNA. Translation: CAU03657.1.
FM897141 Genomic DNA. Translation: CAU03658.1.
FM897142 Genomic DNA. Translation: CAU03659.1.
FM897143 Genomic DNA. Translation: CAU03660.1.
FM897144 Genomic DNA. Translation: CAU03661.1.
FM897148 Genomic DNA. Translation: CAU03665.1.
FM897149 Genomic DNA. Translation: CAU03666.1.
FM897150 Genomic DNA. Translation: CAU03667.1.
FM897151 Genomic DNA. Translation: CAU03668.1.
FM897152 Genomic DNA. Translation: CAU03669.1.
FM897153 Genomic DNA. Translation: CAU03670.1.
FM897154 Genomic DNA. Translation: CAU03671.1.
FM897155 Genomic DNA. Translation: CAU03672.1.
FM897156 Genomic DNA. Translation: CAU03673.1.
FM897157 Genomic DNA. Translation: CAU03674.1.
FM897158 Genomic DNA. Translation: CAU03675.1.
FM897159 Genomic DNA. Translation: CAU03676.1.
FM897160 Genomic DNA. Translation: CAU03677.1.
FM897161 Genomic DNA. Translation: CAU03678.1.
FM897162 Genomic DNA. Translation: CAU03679.1.
FM897163 Genomic DNA. Translation: CAU03680.1.
FM897164 Genomic DNA. Translation: CAU03681.1.
FM897165 Genomic DNA. Translation: CAU03682.1.
FR751320 Genomic DNA. Translation: CBY85394.1.
FR751322 Genomic DNA. Translation: CBY85412.1.
FR751323 Genomic DNA. Translation: CBY85421.1.
FR751324 Genomic DNA. Translation: CBY85430.1.
FR751325 Genomic DNA. Translation: CBY85439.1.
FR751326 Genomic DNA. Translation: CBY85448.1.
FR751329 Genomic DNA. Translation: CBY85475.1.
FR751330 Genomic DNA. Translation: CBY85484.1.
FR751331 Genomic DNA. Translation: CBY85493.1.
FR751332 Genomic DNA. Translation: CBY85502.1.
FR751333 Genomic DNA. Translation: CBY85511.1.
FR751334 Genomic DNA. Translation: CBY85520.1.
FR751335 Genomic DNA. Translation: CBY85529.1.
FR751336 Genomic DNA. Translation: CBY85538.1.
FR751337 Genomic DNA. Translation: CBY85547.1.
FR751338 Genomic DNA. Translation: CBY85556.1.
HE599226 Genomic DNA. Translation: CCD42057.1.
HE599227 Genomic DNA. Translation: CCD42066.1.
HE599228 Genomic DNA. Translation: CCD42075.1.
HE599229 Genomic DNA. Translation: CCD42084.1.
HE599230 Genomic DNA. Translation: CCD42093.1.
HE599231 Genomic DNA. Translation: CCD42102.1.
HE599232 Genomic DNA. Translation: CCD42111.1.
HE599233 Genomic DNA. Translation: CCD42120.1.
HE599234 Genomic DNA. Translation: CCD42129.1.
HE599235 Genomic DNA. Translation: CCD42138.1.
HE599236 Genomic DNA. Translation: CCD42147.1.
HE599237 Genomic DNA. Translation: CCD42156.1.
HE599238 Genomic DNA. Translation: CCD42165.1.
HE599239 Genomic DNA. Translation: CCD42174.1.
HE599240 Genomic DNA. Translation: CCD42183.1.
HE599241 Genomic DNA. Translation: CCD42192.1.
HE599242 Genomic DNA. Translation: CCD42201.1.
HE599243 Genomic DNA. Translation: CCD42210.1.
HE599244 Genomic DNA. Translation: CCD42219.1.
HE599245 Genomic DNA. Translation: CCD42228.1.
HE599246 Genomic DNA. Translation: CCD42237.1.
HE962026 Genomic DNA. Translation: CCJ09331.1.
HE962028 Genomic DNA. Translation: CCJ09349.1.
HE962029 Genomic DNA. Translation: CCJ09358.1.
HE962030 Genomic DNA. Translation: CCJ09367.1.
HE962031 Genomic DNA. Translation: CCJ09376.1.
HE962032 Genomic DNA. Translation: CCJ09385.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.175.20. 1 hit.
InterProIPR002210. Capsid_L1_Papillomavir.
IPR011222. dsDNA_vir_gr_I_capsid.
[Graphical view]
PfamPF00500. Late_protein_L1. 1 hit.
[Graphical view]
PRINTSPR00865. HPVCAPSIDL1.
SUPFAMSSF88648. SSF88648. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ775J6_9PAPI
AccessionPrimary (citable) accession number: Q775J6
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)