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Protein
Submitted name:

IMV membrane protein

Gene

N1R

Organism
Cowpox virus (CPV)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
IMV membrane proteinImported
Submitted name:
N1R proteinImported
Gene namesi
Name:N1RImported
ORF Names:CPXV_FIN2000_MAN_093Imported
OrganismiCowpox virus (CPV)Imported
Taxonomic identifieri10243 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirus
Virus hostiApodemus sylvaticus (European woodmouse) [TaxID: 10129]
Bos taurus (Bovine) [TaxID: 9913]
Felis catus (Cat) (Felis silvestris catus) [TaxID: 9685]
Homo sapiens (Human) [TaxID: 9606]
Loxodonta africana (African elephant) [TaxID: 9785]
Microtus agrestis (Short-tailed field vole) [TaxID: 29092]
Mus musculus (Mouse) [TaxID: 10090]
Myodes glareolus (Bank vole) (Clethrionomys glareolus) [TaxID: 447135]
Proteomesi
  • UP000113999 Componenti: Genome
  • UP000137384 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei186 – 204HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ76QK2.
SMRiQ76QK2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.

Sequencei

Sequence statusi: Complete.

Q76QK2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAAASIQTT VNTLSERISS KLEQEANASA QTKCDIEIGN FYIRQNHGCN
60 70 80 90 100
LTVKNMCSAD ADAQLDAVLS AATETYSGLT PEQKAYVPAM FTAALNIQTS
110 120 130 140 150
VNTVVRDFEN YVKQTCNSSA VVDNKLKIQN VIIDECYGAP GSPTNLEFIN
160 170 180 190 200
TGSSKGNCAI KALMQLTTKA TTQIAPKQVA GTGVQFYMIV IGVIILAALF
210 220 230 240 250
MYYAKRMLFT STNDKIKLIL ANKENVHWTT YMDTFFRTSP MVIATTDMQN
Length:250
Mass (Da):27,279
Last modified:July 5, 2004 - v1
Checksum:i28FE89850863372D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ420893 Genomic DNA. Translation: ADZ29210.1.
X94355 Genomic DNA. Translation: CAD90637.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ420893 Genomic DNA. Translation: ADZ29210.1.
X94355 Genomic DNA. Translation: CAD90637.1.

3D structure databases

ProteinModelPortaliQ76QK2.
SMRiQ76QK2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ76QK2_COWPX
AccessioniPrimary (citable) accession number: Q76QK2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 12, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.