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Protein
Submitted name:

Alginate lyase

Gene

aly

Organism
Sphingomonas sp. A1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-17106.
BRENDAi4.2.2.3. 5801.

Protein family/group databases

CAZyiPL7. Polysaccharide Lyase Family 7.

Names & Taxonomyi

Protein namesi
Submitted name:
Alginate lyaseImported
Gene namesi
Name:alyImported
OrganismiSphingomonas sp. A1Imported
Taxonomic identifieri90322 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2CWSX-ray1.00A81-308[»]
2Z42X-ray1.60A81-308[»]
2ZA9X-ray2.10A81-308[»]
2ZAAX-ray1.80A81-308[»]
2ZABX-ray1.66A81-308[»]
2ZACX-ray1.50A81-308[»]
ProteinModelPortaliQ75WP3.
SMRiQ75WP3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ75WP3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 306Alginate_lyase2InterPro annotationAdd BLAST218

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.

Sequencei

Sequence statusi: Complete.

Q75WP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKQCGWYAV VLCVALAACG GGGGDSGGTS LPASSSSSSK SSAGSSSSKT
60 70 80 90 100
SASSSVSSSS STTSSAAASS SSQSSSSSLD PAAAPGKNFD LSHWKLQLPD
110 120 130 140 150
ANTTEISSAN LGLGYTSQYF YTDTDGAMTF WAPTTGGTTA NSSYPRSELR
160 170 180 190 200
EMLDPSNSKV NWGWQGTHTM KLSGKTVQLP SSGKIIVAQI HGIMDDGTNA
210 220 230 240 250
PPLVKAVFQD GQLDMQVKQN SDGTGSDVHN YFTGIKLGDL YNMEIRVTDG
260 270 280 290 300
VAYVTMNGDT RSVDFVGKDA GWKNLKYYFK AGNYVQDNTS TGGSAIAKLY

SLSVSHSN
Length:308
Mass (Da):32,025
Last modified:July 5, 2004 - v1
Checksum:i99ABAD8CE5482403
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB120939 Genomic DNA. Translation: BAD16656.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB120939 Genomic DNA. Translation: BAD16656.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2CWSX-ray1.00A81-308[»]
2Z42X-ray1.60A81-308[»]
2ZA9X-ray2.10A81-308[»]
2ZAAX-ray1.80A81-308[»]
2ZABX-ray1.66A81-308[»]
2ZACX-ray1.50A81-308[»]
ProteinModelPortaliQ75WP3.
SMRiQ75WP3.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiPL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-17106.
BRENDAi4.2.2.3. 5801.

Miscellaneous databases

EvolutionaryTraceiQ75WP3.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ75WP3_9SPHN
AccessioniPrimary (citable) accession number: Q75WP3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.