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Q75WH8 (Q75WH8_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding2191Cobalt 1 PDB 3IUH
Metal binding2191Copper 1 PDB 3IUD
Metal binding2191Manganese 1 PDB 3ITL PDB 3ITX PDB 3ITV PDB 3ITT PDB 3ITO PDB 3M0H PDB 3M0L PDB 3M0M PDB 3M0V PDB 3M0Y PDB 3M0X PDB 4GJI PDB 4GJJ
Metal binding2191Zinc 1 PDB 2HCV PDB 2I56 PDB 2I57 PDB 3IUI
Metal binding2541Cobalt 1 PDB 3IUH
Metal binding2541Copper 1 PDB 3IUD
Metal binding2541Manganese 1 PDB 3ITL PDB 3ITX PDB 3ITV PDB 3ITT PDB 3ITO PDB 3M0H PDB 3M0L PDB 3M0M PDB 3M0V PDB 3M0Y PDB 3M0X PDB 4GJI PDB 4GJJ
Metal binding2541Zinc 1 PDB 2HCV PDB 2I56 PDB 2I57 PDB 3IUI
Metal binding2571Cobalt 2; via tele nitrogen PDB 3IUH
Metal binding2571Copper 2; via tele nitrogen PDB 3IUD
Metal binding2571Copper 3; via tele nitrogen PDB 3IUD
Metal binding2571Manganese 2; via tele nitrogen PDB 3ITT PDB 4GJJ
Metal binding2571Manganese 3; via tele nitrogen PDB 3ITX PDB 4GJJ
Metal binding2571Zinc 2; via tele nitrogen PDB 2I56 PDB 2I57 PDB 3IUI
Metal binding2571Zinc 3; via tele nitrogen PDB 2I56
Metal binding2811Cobalt 1; via pros nitrogen PDB 3IUH
Metal binding2811Copper 1; via pros nitrogen PDB 3IUD
Metal binding2811Manganese 1; via pros nitrogen PDB 3ITL PDB 3ITX PDB 3ITV PDB 3ITT PDB 3ITO PDB 3M0H PDB 3M0L PDB 3M0M PDB 3M0V PDB 3M0Y PDB 3M0X PDB 4GJI PDB 4GJJ
Metal binding2811Zinc 1; via pros nitrogen PDB 2HCV PDB 2I56 PDB 2I57 PDB 3IUI
Metal binding2891Cobalt 2 PDB 3IUH
Metal binding2891Copper 2 PDB 3IUD
Metal binding2891Copper 3 PDB 3IUD
Metal binding2891Manganese 2 PDB 3ITT PDB 4GJJ
Metal binding2891Manganese 3 PDB 3ITX PDB 4GJJ
Metal binding2891Zinc 2 PDB 2I56 PDB 2I57 PDB 3IUI
Metal binding2891Zinc 3 PDB 2I56
Metal binding2911Cobalt 2 PDB 3IUH
Metal binding2911Copper 2 PDB 3IUD
Metal binding2911Copper 3 PDB 3IUD
Metal binding2911Manganese 2 PDB 4GJJ
Metal binding2911Manganese 3 PDB 3ITX PDB 4GJJ
Metal binding2911Zinc 2 PDB 3IUI
Metal binding2911Zinc 3 PDB 2I56
Metal binding2981Manganese 1 PDB 4GJI
Metal binding3271Cobalt 1 PDB 3IUH
Metal binding3271Copper 1 PDB 3IUD
Metal binding3271Manganese 1 PDB 3ITX PDB 3ITV PDB 3ITT PDB 3M0H PDB 3M0L PDB 3M0M PDB 3M0V PDB 3M0Y PDB 3M0X PDB 4GJI PDB 4GJJ
Metal binding3271Zinc 1 PDB 2HCV PDB 2I56 PDB 2I57 PDB 3IUI

Sequences

Sequence LengthMass (Da)Tools
Q75WH8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 2E2FBA87068472A7

FASTA43046,975
        10         20         30         40         50         60 
MAEFRIAQDV VARENDRRAS ALKEDYEALG ANLARRGVDI EAVTAKVEKF FVAVPSWGVG 

        70         80         90        100        110        120 
TGGTRFARFP GTGEPRGIFD KLDDCAVIQQ LTRATPNVSL HIPWDKADPK ELKARGDALG 

       130        140        150        160        170        180 
LGFDAMNSNT FSDAPGQAHS YKYGSLSHTD AATRAQAVEH NLECIEIGKA IGSKALTVWI 

       190        200        210        220        230        240 
GDGSNFPGQS NFTRAFERYL SAMAEIYKGL PDDWKLFSEH KMYEPAFYST VVQDWGTNYL 

       250        260        270        280        290        300 
IAQTLGPKAQ CLVDLGHHAP NTNIEMIVAR LIQFGKLGGF HFNDSKYGDD DLDAGAIEPY 

       310        320        330        340        350        360 
RLFLVFNELV DAEARGVKGF HPAHMIDQSH NVTDPIESLI NSANEIRRAY AQALLVDRAA 

       370        380        390        400        410        420 
LSGYQEDNDA LMATETLKRA YRTDVEPILA EARRRTGGAV DPVATYRASG YRARVAAERP 

       430 
ASVAGGGGII 

« Hide

References

[1]"Cloning, nucleotide sequence, and overexpression of the L-rhamnose isomerase gene from Pseudomonas stutzeri in Escherichia coli."
Leang K., Takada G., Ishimura A., Okita M., Izumori K.
Appl. Environ. Microbiol. 70:3298-3304(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The structures of L-rhamnose isomerase from Pseudomonas stutzeri in complexes with L-rhamnose and D-allose provide insights into broad substrate specificity."
Yoshida H., Yamada M., Ohyama Y., Takada G., Izumori K., Kamitori S.
J. Mol. Biol. 365:1505-1516(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.97 ANGSTROMS) IN COMPLEX WITH ZINC.
[3]"Catalytic reaction mechanism of Pseudomonas stutzeri L-rhamnose isomerase deduced from X-ray structures."
Yoshida H., Yamaji M., Ishii T., Izumori K., Kamitori S.
FEBS J. 277:1045-1057(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) IN COMPLEX WITH COBALT; COPPER; MANGANESE AND ZINC.
[4]"Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase."
Yoshida H., Takeda K., Izumori K., Kamitori S.
Protein Eng. Des. Sel. 23:919-927(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS) IN COMPLEX WITH MANGANESE.
[5]"Complex structure of L-rhamnose isomerase with L-rhanmopyranose demonstrates sugar-ring opening mechanism and role of substrate sub-binding site."
Yoshida H., Kamitori S.
Submitted (AUG-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH MANGANESE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB121136 Genomic DNA. Translation: BAD14073.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2HCVX-ray2.00A/B/C/D1-430[»]
2I56X-ray1.97A/B/C/D1-430[»]
2I57X-ray1.97A/B/C/D1-430[»]
3ITLX-ray1.70A/B/C/D1-430[»]
3ITOX-ray1.90A/B/C/D1-430[»]
3ITTX-ray1.96A/B/C/D1-430[»]
3ITVX-ray1.60A/B/C/D1-430[»]
3ITXX-ray1.80A/B/C/D1-430[»]
3ITYX-ray1.84A/B/C/D1-430[»]
3IUDX-ray2.44A/B/C/D1-430[»]
3IUHX-ray2.00A/B/C/D1-430[»]
3IUIX-ray2.30A/B/C/D1-430[»]
3M0HX-ray1.58A/B/C/D1-430[»]
3M0LX-ray1.85A/B/C/D1-430[»]
3M0MX-ray1.45A/B/C/D1-430[»]
3M0VX-ray1.79A/B/C/D1-430[»]
3M0XX-ray1.79A/B/C/D1-430[»]
3M0YX-ray1.96A/B/C/D1-430[»]
4GJIX-ray1.70A/B/C/D1-430[»]
4GJJX-ray2.38A/B/C/D1-430[»]
ProteinModelPortalQ75WH8.
SMRQ75WH8. Positions 3-430.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-7384859.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

BRENDA5.3.1.14. 421.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013451. L_rhamnose_iso.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02629. L_rham_iso_rhiz. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ75WH8.

Entry information

Entry nameQ75WH8_PSEST
AccessionPrimary (citable) accession number: Q75WH8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)