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Protein
Submitted name:

L-rhamnose isomerase

Gene

L-RhI

Organism
Pseudomonas stutzeri (Pseudomonas perfectomarina)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi219Copper 1Combined sources1
Metal bindingi219Manganese 1Combined sources1
Metal bindingi219Zinc 1Combined sources1
Metal bindingi254Copper 1Combined sources1
Metal bindingi254Manganese 1Combined sources1
Metal bindingi254Zinc 1Combined sources1
Metal bindingi257Copper 2; via tele nitrogenCombined sources1
Metal bindingi257Copper 3; via tele nitrogenCombined sources1
Metal bindingi257Manganese 2; via tele nitrogenCombined sources1
Metal bindingi257Manganese 3; via tele nitrogenCombined sources1
Metal bindingi257Zinc 2; via tele nitrogenCombined sources1
Metal bindingi257Zinc 3; via tele nitrogenCombined sources1
Metal bindingi281Copper 1; via pros nitrogenCombined sources1
Metal bindingi281Manganese 1; via pros nitrogenCombined sources1
Metal bindingi281Zinc 1; via pros nitrogenCombined sources1
Metal bindingi289Copper 2Combined sources1
Metal bindingi289Copper 3Combined sources1
Metal bindingi289Manganese 2Combined sources1
Metal bindingi289Manganese 3Combined sources1
Metal bindingi289Zinc 2Combined sources1
Metal bindingi289Zinc 3Combined sources1
Metal bindingi291Copper 2Combined sources1
Metal bindingi291Copper 3Combined sources1
Metal bindingi291Manganese 2Combined sources1
Metal bindingi291Manganese 3Combined sources1
Metal bindingi291Zinc 2Combined sources1
Metal bindingi291Zinc 3Combined sources1
Metal bindingi298Manganese 1Combined sources1
Metal bindingi327Copper 1Combined sources1
Metal bindingi327Manganese 1Combined sources1
Metal bindingi327Zinc 1Combined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Keywords - Ligandi

CopperCombined sources, ManganeseCombined sources, Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BRENDAi5.3.1.14. 5158.

Names & Taxonomyi

Protein namesi
Submitted name:
L-rhamnose isomeraseImported
Gene namesi
Name:L-RhIImported
OrganismiPseudomonas stutzeri (Pseudomonas perfectomarina)Imported
Taxonomic identifieri316 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Interactioni

Protein-protein interaction databases

MINTiMINT-7384859.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HCVX-ray2.00A/B/C/D1-430[»]
2I56X-ray1.97A/B/C/D1-430[»]
2I57X-ray1.97A/B/C/D1-430[»]
3ITLX-ray1.70A/B/C/D1-430[»]
3ITOX-ray1.90A/B/C/D1-430[»]
3ITTX-ray1.96A/B/C/D1-430[»]
3ITVX-ray1.60A/B/C/D1-430[»]
3ITXX-ray1.80A/B/C/D1-430[»]
3ITYX-ray1.84A/B/C/D1-430[»]
3IUDX-ray2.44A/B/C/D1-430[»]
3IUHX-ray2.00A/B/C/D1-430[»]
3IUIX-ray2.30A/B/C/D1-430[»]
3M0HX-ray1.58A/B/C/D1-430[»]
3M0LX-ray1.85A/B/C/D1-430[»]
3M0MX-ray1.45A/B/C/D1-430[»]
3M0VX-ray1.79A/B/C/D1-430[»]
3M0XX-ray1.79A/B/C/D1-430[»]
3M0YX-ray1.96A/B/C/D1-430[»]
4GJIX-ray1.70A/B/C/D1-430[»]
4GJJX-ray2.38A/B/C/D1-430[»]
ProteinModelPortaliQ75WH8.
SMRiQ75WH8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ75WH8.

Family & Domainsi

Phylogenomic databases

KOiK01820.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013451. L_rhamnose_iso.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02629. L_rham_iso_rhiz. 1 hit.

Sequencei

Sequence statusi: Complete.

Q75WH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEFRIAQDV VARENDRRAS ALKEDYEALG ANLARRGVDI EAVTAKVEKF
60 70 80 90 100
FVAVPSWGVG TGGTRFARFP GTGEPRGIFD KLDDCAVIQQ LTRATPNVSL
110 120 130 140 150
HIPWDKADPK ELKARGDALG LGFDAMNSNT FSDAPGQAHS YKYGSLSHTD
160 170 180 190 200
AATRAQAVEH NLECIEIGKA IGSKALTVWI GDGSNFPGQS NFTRAFERYL
210 220 230 240 250
SAMAEIYKGL PDDWKLFSEH KMYEPAFYST VVQDWGTNYL IAQTLGPKAQ
260 270 280 290 300
CLVDLGHHAP NTNIEMIVAR LIQFGKLGGF HFNDSKYGDD DLDAGAIEPY
310 320 330 340 350
RLFLVFNELV DAEARGVKGF HPAHMIDQSH NVTDPIESLI NSANEIRRAY
360 370 380 390 400
AQALLVDRAA LSGYQEDNDA LMATETLKRA YRTDVEPILA EARRRTGGAV
410 420 430
DPVATYRASG YRARVAAERP ASVAGGGGII
Length:430
Mass (Da):46,975
Last modified:July 5, 2004 - v1
Checksum:i2E2FBA87068472A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB121136 Genomic DNA. Translation: BAD14073.1.

Genome annotation databases

KEGGiag:BAD14073.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB121136 Genomic DNA. Translation: BAD14073.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HCVX-ray2.00A/B/C/D1-430[»]
2I56X-ray1.97A/B/C/D1-430[»]
2I57X-ray1.97A/B/C/D1-430[»]
3ITLX-ray1.70A/B/C/D1-430[»]
3ITOX-ray1.90A/B/C/D1-430[»]
3ITTX-ray1.96A/B/C/D1-430[»]
3ITVX-ray1.60A/B/C/D1-430[»]
3ITXX-ray1.80A/B/C/D1-430[»]
3ITYX-ray1.84A/B/C/D1-430[»]
3IUDX-ray2.44A/B/C/D1-430[»]
3IUHX-ray2.00A/B/C/D1-430[»]
3IUIX-ray2.30A/B/C/D1-430[»]
3M0HX-ray1.58A/B/C/D1-430[»]
3M0LX-ray1.85A/B/C/D1-430[»]
3M0MX-ray1.45A/B/C/D1-430[»]
3M0VX-ray1.79A/B/C/D1-430[»]
3M0XX-ray1.79A/B/C/D1-430[»]
3M0YX-ray1.96A/B/C/D1-430[»]
4GJIX-ray1.70A/B/C/D1-430[»]
4GJJX-ray2.38A/B/C/D1-430[»]
ProteinModelPortaliQ75WH8.
SMRiQ75WH8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-7384859.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGiag:BAD14073.

Phylogenomic databases

KOiK01820.

Enzyme and pathway databases

BRENDAi5.3.1.14. 5158.

Miscellaneous databases

EvolutionaryTraceiQ75WH8.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013451. L_rhamnose_iso.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02629. L_rham_iso_rhiz. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ75WH8_PSEST
AccessioniPrimary (citable) accession number: Q75WH8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.