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Protein

Probable D-serine dehydratase

Gene

dsdA

Organism
Geobacillus kaustophilus (strain HTA426)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-serine = pyruvate + NH3.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyase
LigandPyridoxal phosphate

Names & Taxonomyi

Protein namesi
Recommended name:
Probable D-serine dehydrataseUniRule annotation (EC:4.3.1.18UniRule annotation)
Alternative name(s):
D-serine deaminaseUniRule annotation
Short name:
DSDUniRule annotation
Gene namesi
Name:dsdAUniRule annotation
Ordered Locus Names:GK1922
ORF Names:GKB09
OrganismiGeobacillus kaustophilus (strain HTA426)
Taxonomic identifieri235909 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillusGeobacillus thermoleovorans group
Proteomesi
  • UP000001172 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002917311 – 441Probable D-serine dehydrataseAdd BLAST441

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei101N6-(pyridoxal phosphate)lysineUniRule annotation1

Proteomic databases

PRIDEiQ75TC9

Interactioni

Protein-protein interaction databases

STRINGi235909.GK1922

Structurei

3D structure databases

ProteinModelPortaliQ75TC9
SMRiQ75TC9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the serine/threonine dehydratase family. DsdA subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105BZC Bacteria
COG3048 LUCA
HOGENOMiHOG000218072
KOiK01753
OMAiESDPNCF
OrthoDBiPOG091H0G2T

Family and domain databases

HAMAPiMF_01030 D_Ser_dehydrat, 1 hit
InterProiView protein in InterPro
IPR011780 D_Ser_am_lyase
IPR001926 PLP-dep
IPR000634 Ser/Thr_deHydtase_PyrdxlP-BS
IPR036052 Trypto_synt_PLP_dependent
PANTHERiPTHR43419:SF2 PTHR43419:SF2, 1 hit
PfamiView protein in Pfam
PF00291 PALP, 1 hit
SUPFAMiSSF53686 SSF53686, 1 hit
TIGRFAMsiTIGR02035 D_Ser_am_lyase, 1 hit
PROSITEiView protein in PROSITE
PS00165 DEHYDRATASE_SER_THR, 1 hit

Sequencei

Sequence statusi: Complete.

Q75TC9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIMAAEEVFW RNPKYHAFAQ AIRTIPLRER DVKEAEERLR RFAPYIAKVF
60 70 80 90 100
PETQPAHGII ESPLVRIPNM QRRLEKMFQT NIEGDLLLKC DSHLPISGSI
110 120 130 140 150
KARGGIYEVL KHAEDLALAN GMIAIGEDYA VMASEEFRQF FSRYSLVVGS
160 170 180 190 200
TGNLGLSIGI IGAQLGFRVT VHMSADAKQW KKDLLRSKGV TVIEHLTDYN
210 220 230 240 250
KVVEEARRQS AEDPTSYFID DENSIHLFLG YAVAAFRLKK QLEDMNITVD
260 270 280 290 300
ETHPLFVYLP CGVGGGPGGV TFGLKLVYGD HVHCFFAEPT HSPCMLLGLM
310 320 330 340 350
TGEHDRVSVQ DFGLDNKTEA DGLAVGRPSR LVGNMLENVI SGVYTVDDST
360 370 380 390 400
LYRLLAAMVE TEEIYLEPSA LAGVAGPVRL FRDSAGQTYV EENDLKEKMK
410 420 430 440
NAVHICWATG GSMVPKGVME AYYREGMRIE TMTGNCFSEG R
Length:441
Mass (Da):49,082
Last modified:July 5, 2004 - v1
Checksum:i540C62A7F01ACEB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB126619 Genomic DNA Translation: BAD18349.1
BA000043 Genomic DNA Translation: BAD76207.1
RefSeqiWP_011231408.1, NC_006510.1

Genome annotation databases

EnsemblBacteriaiBAD76207; BAD76207; GK1922
KEGGigka:GK1922
PATRICifig|235909.7.peg.2061

Similar proteinsi

Entry informationi

Entry nameiSDHD_GEOKA
AccessioniPrimary (citable) accession number: Q75TC9
Secondary accession number(s): Q5KYM9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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