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Q75IV7

- 6PGL1_ORYSJ

UniProt

Q75IV7 - 6PGL1_ORYSJ

Protein

Probable 6-phosphogluconolactonase 1

Gene

Os03g0416500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

    Catalytic activityi

    6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

    Pathwayi

    GO - Molecular functioni

    1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

    GO - Biological processi

    1. pentose-phosphate shunt Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Hydrolase

    Enzyme and pathway databases

    UniPathwayiUPA00115; UER00409.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable 6-phosphogluconolactonase 1 (EC:3.1.1.31)
    Short name:
    6PGL 1
    Gene namesi
    Ordered Locus Names:Os03g0416500, LOC_Os03g30300
    ORF Names:OsJ_010814, OSJNBb0059G13.23
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiQ75IV7.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 296296Probable 6-phosphogluconolactonase 1PRO_0000288674Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ75IV7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0363.
    KOiK01057.
    OMAiNDCPRFD.

    Family and domain databases

    InterProiIPR005900. 6-phosphogluconolactonase_DevB.
    IPR006148. Glc/Gal-6P_isomerase.
    [Graphical view]
    PfamiPF01182. Glucosamine_iso. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01198. pgl. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q75IV7-1 [UniParc]FASTAAdd to Basket

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    MLSWNNSWHS SSTENRTMER EIVASYEPKK NNEIRMFESS DEMATDLAEY    50
    ISQVSEISIK ERGYFAIALS GGPLISFMRK LCEAPYNKTL DWSKWYIFWA 100
    DERAVAKNHV DSYYKSTKED FLSKVPILNG HVYSINDNVT VEDAATDYEF 150
    VIRQLVKIRT VGVSESNDCP KFDLILLSIG SDGHVASLFP NHPALELKDD 200
    WVTYITDSPV PPPERITFTL PVINSASNIA VVATGEDKAK AVYFAISDGT 250
    EGPDAPSIPA RMVQPTDGKL VWFLDKASAS FLEAKTKNDG YEHPKY 296
    Length:296
    Mass (Da):33,270
    Last modified:July 5, 2004 - v1
    Checksum:i36B72EAB4C2FE65A
    GO

    Sequence cautioni

    The sequence EAZ27331.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC120538 Genomic DNA. Translation: AAS07092.1.
    DP000009 Genomic DNA. Translation: ABF96623.1.
    AP008209 Genomic DNA. Translation: BAF12283.1.
    CM000140 Genomic DNA. Translation: EAZ27331.1. Sequence problems.
    AK103024 mRNA. No translation available.
    RefSeqiNP_001050369.1. NM_001056904.1.
    UniGeneiOs.24545.

    Genome annotation databases

    EnsemblPlantsiOS03T0416500-01; OS03T0416500-01; OS03G0416500.
    OS03T0416500-02; OS03T0416500-02; OS03G0416500.
    GeneIDi4333117.
    KEGGiosa:4333117.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC120538 Genomic DNA. Translation: AAS07092.1 .
    DP000009 Genomic DNA. Translation: ABF96623.1 .
    AP008209 Genomic DNA. Translation: BAF12283.1 .
    CM000140 Genomic DNA. Translation: EAZ27331.1 . Sequence problems.
    AK103024 mRNA. No translation available.
    RefSeqi NP_001050369.1. NM_001056904.1.
    UniGenei Os.24545.

    3D structure databases

    ProteinModelPortali Q75IV7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0416500-01 ; OS03T0416500-01 ; OS03G0416500 .
    OS03T0416500-02 ; OS03T0416500-02 ; OS03G0416500 .
    GeneIDi 4333117.
    KEGGi osa:4333117.

    Organism-specific databases

    Gramenei Q75IV7.

    Phylogenomic databases

    eggNOGi COG0363.
    KOi K01057.
    OMAi NDCPRFD.

    Enzyme and pathway databases

    UniPathwayi UPA00115 ; UER00409 .

    Family and domain databases

    InterProi IPR005900. 6-phosphogluconolactonase_DevB.
    IPR006148. Glc/Gal-6P_isomerase.
    [Graphical view ]
    Pfami PF01182. Glucosamine_iso. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01198. pgl. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry namei6PGL1_ORYSJ
    AccessioniPrimary (citable) accession number: Q75IV7
    Secondary accession number(s): A3AJ42
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 29, 2007
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3