Q75HM4 (Q75HM4_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative RNA polymerase EMBL AAR89892.1

Gene names

Name:	OSJNBb0011J16.18 EMBL AAR89892.1
Ordered Locus Names:	LOC_Os03g41300 EMBL AAR87356.1

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome]

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	205 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q75HM4 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 9A68114747011FAC	FASTA	205	22,769
	10 20 30 40 50 60 MPPPPPLPRG GPFVVAPRPP RSGVSKPFVG EVLVGKISGY DEKGLHVSLD FFNDICIPGH 70 80 90 100 110 120 LMQYGTASYP LDFLNPITPN GFPPRANSKS KLSVILLRNI DPNNGLCNST RLMLYVTLSR 130 140 150 160 170 180 GFLRQTTKIL VKPKKEVDST GKSTRNIVYK YDLDWALDGR WMLKTEDGDE LYLDLDDEGS 190 200 IKGDGLGLLA WWYADEEEGE AEAEE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence." Buell C.R., Yuan Q., Ouyang S., Liu J., Gansberger K., Jones K.M., Overton II L.L., Tsitrin T., Kim M.M., Bera J.J., Jin S.S., Fadrosh D.W., Tallon L.J., Koo H., Zismann V., Hsiao J., Blunt S., Vanaken S.S. , Riedmuller S.B., Utterback T.T., Feldblyum T.V., Yang Q.Q., Haas B.J., Suh B.B., Peterson J.J., Quackenbush J., White O., Salzberg S.L., Fraser C.M. Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Buell C., Yuan Q., Ouyang S., Liu J., Wang A., Maiti R., Lin H., Zhu W., Hamilton J., Jones K., Tallon L., Feldblyum T., Tsitrin T., Bera J., Kim M., Jin S., Fadrosh D., Vuong H. , Overton II L., Reardon M., Weaver B., Johri S., Lewis M., Utterback T., Van Aken S., Wortman J., Haas B., Koo H., Zismann V., Hsiao J., Iobst S., de Vazeilles A., White O., Salzberg S., Fraser C. Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Buell R. Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species." The rice chromosome 3 sequencing consortium Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S. Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[5]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[6]	Buell R. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	Buell R., Wing R.A., McCombie W.A., Ouyang S. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[8]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC135500 Genomic DNA. Translation: AAR87356.1. AC135501 Genomic DNA. Translation: AAR89892.1. DP000009 Genomic DNA. Translation: ABF97566.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	LOC_Os03g41300.1; LOC_Os03g41300.1; LOC_Os03g41300.
Family and domain databases
InterPro	IPR010285. DNA_helicase_PIF1. IPR012340. NA-bd_OB-fold. IPR013238. RNA_pol_III_Rbc25. [Graphical view]
Pfam	PF05970. PIF1. 1 hit. PF08292. RNA_pol_Rbc25. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q75HM4_ORYSJ

Accession

Primary (citable) accession number: Q75HM4

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	April 3, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)