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Q75E62 (SQS1_ASHGO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein SQS1
Gene names
Name:SQS1
Ordered Locus Names:ABL192C
OrganismAshbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast) (Eremothecium gossypii) [Reference proteome]
Taxonomic identifier284811 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Eremothecium ›

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in splicing By similarity.

Subcellular location

Cytoplasm By similarity. Nucleus By similarity.

Sequence similarities

Belongs to the SQS1 family.

Contains 1 G-patch domain.

Contains 1 R3H domain.

Ontologies

Keywords
   Biological processmRNA processing
mRNA splicing
   Cellular componentCytoplasm
Nucleus
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processRNA splicing

Inferred from electronic annotation. Source: UniProtKB-KW

mRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

nucleus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 679679Protein SQS1
PRO_0000324993

Regions

Domain514 – 57663R3H
Domain633 – 67947G-patch

Sequences

Sequence LengthMass (Da)Tools
Q75E62 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 3185379DD37994D2

FASTA67976,536
        10         20         30         40         50         60 
MAKRHKHYEN RGSSGRGRRG GRAGHRGRGG RRRYAERNNS ERAAPVWAGS GDLGNPEMVD 

        70         80         90        100        110        120 
DYYFGRQADR RLWKKDSMRM GGFRPGDMGA SEQPQSHLPA RKRPVTFTLA RDVYDPSHNL 

       130        140        150        160        170        180 
NQLLNKQLDE GAEEEDSNSS SPSASGDDEP EGEYEPNPEP KMYRISELND DALFFVDEQG 

       190        200        210        220        230        240 
KLPTKIPAVE VAQQETPRSV EFNDTLTVGK VQLQLRQDSN GGTFVDAPHA KRIFRDDLYG 

       250        260        270        280        290        300 
DVSEEEDEPE TPKTEQLDNS KSVRTMQPPS PVPQLLSTNI GRLTLSELAS ESESDTEKPT 

       310        320        330        340        350        360 
AEAGAEPPKG EPGFGFLDED HLADMSEIQV TNIRLGAAAH SYFVASPRTF GDSVARWVDH 

       370        380        390        400        410        420 
DTMVDIALEL GLPEGRLHAY LRHVYEQLVP PEEPADDGAD DHYGDENYDD SEEDEQDDEY 

       430        440        450        460        470        480 
ENDGLIALVE HTLANDPYRN RDYNTKSLEY RGHGSRKRLI IDKESMIDET VRTLLEDKAA 

       490        500        510        520        530        540 
QRSAKRAAKR HAKEDYIAEE ARMSSDLFRK YPYGFHIENI IDELEAFLVS PRAALEFPPL 

       550        560        570        580        590        600 
DPHGRRTLKN LACAFALICK QVGQSTHTRV LVQKGGRYEP DYDAVNRIRR QRRVFMRVDV 

       610        620        630        640        650        660 
RRPRDDITPR EPRAKFHVRE GAIVGGDAPT IGQDNVGRRL LEKLGWTHGE GLGVHGNKGI 

       670 
SEPLMARVKK NRSGLRYTE

« Hide

References

[1]"The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome."
Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S., Mohr C., Poehlmann R., Luedi P., Choi S., Wing R.A., Flavier A., Gaffney T.D., Philippsen P.
Science 304:304-307(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE016815 Genomic DNA. Translation: AAS50579.1.
RefSeqNP_982755.1. NM_208108.1.

3D structure databases

ProteinModelPortalQ75E62.
ModBaseSearch...

Protein-protein interaction databases

STRING33169.AGOS_ABL192C.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiAAS50579; AAS50579; AGOS_ABL192C.
GeneID4618834.
KEGGago:AGOS_ABL192C.

Phylogenomic databases

eggNOGNOG114135.
HOGENOMHOG000154406.
OMAEVANDTI.
OrthoDBEOG4V46HJ.
PhylomeDBQ75E62.

Family and domain databases

InterProIPR000467. G_patch_dom.
[Graphical view]
PfamPF01585. G-patch. 1 hit.
[Graphical view]
SMARTSM00443. G_patch. 1 hit.
[Graphical view]
PROSITEPS50174. G_PATCH. 1 hit.
PS51061. R3H. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSQS1_ASHGO
AccessionPrimary (citable) accession number: Q75E62
Entry history
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: July 5, 2004
Last modified: May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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