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Protein

50S ribosomal protein L13

Gene

rpl13

Organism
Nanoarchaeum equitans (strain Kin4-M)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rpl13UniRule annotation
Ordered Locus Names:NEQ207
OrganismiNanoarchaeum equitans (strain Kin4-M)
Taxonomic identifieri228908 [NCBI]
Taxonomic lineageiArchaeaNanoarchaeotaNanoarchaealesNanoarchaeaceaeNanoarchaeum
Proteomesi
  • UP000000578 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002618451 – 16250S ribosomal protein L13Add BLAST162

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi228908.NEQ207.

Structurei

3D structure databases

ProteinModelPortaliQ74ND7.
SMRiQ74ND7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04242. Archaea.
COG0102. LUCA.
HOGENOMiHOG000225287.
KOiK02871.
OMAiKHNREMK.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF8. PTHR11545:SF8. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q74ND7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFLGELIYD AEGLVLGRLA SIVARNLKRG YRVKIVNAEK AIITGDPNMV
60 70 80 90 100
KKEWLQKVKR GDYYKGPFYP KRPDNILKRV IRGMLPRKTA RGRELLKNVK
110 120 130 140 150
VYIGVPEELK DKPKLGLNLE NAKGYPEALI KEVLKAKPKF ERGNIKYIEL
160
GELSKYLGAK FT
Length:162
Mass (Da):18,546
Last modified:July 5, 2004 - v1
Checksum:iC4A6981F1615776F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017199 Genomic DNA. Translation: AAR39061.1.

Genome annotation databases

EnsemblBacteriaiAAR39061; AAR39061; NEQ207.
KEGGineq:NEQ207.
PATRICifig|228908.8.peg.211.

Similar proteinsi

Entry informationi

Entry nameiRL13_NANEQ
AccessioniPrimary (citable) accession number: Q74ND7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families